Heyndrickxia coagulans 2-6: BCO26_1717
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Entry
BCO26_1717 CDS
T01527
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bck
Heyndrickxia coagulans 2-6
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bck03019
]
BCO26_1717
03009 Ribosome biogenesis [BR:
bck03009
]
BCO26_1717
Enzymes [BR:
bck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCO26_1717
Messenger RNA biogenesis [BR:
bck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCO26_1717
Ribosome biogenesis [BR:
bck03009
]
Prokaryotic type
rRNA helicases
BCO26_1717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AEH53776
LinkDB
All DBs
Position
complement(1748457..1749767)
Genome browser
AA seq
436 aa
AA seq
DB search
MNGTKWKDFGFKPFIEKAIEHKGFAEPTEIQRKMIPLVLRGESAIGQSQTGTGKTHAYVL
PLLQKTDPSLAEVQAVITAPTRELAAQIYHEIQEVLKWEETGRITAKLFIGGTDKQRDIS
KLKKQPQIVVGTPGRVNDLVKEQALFVHTAKTFVVDEADIMLDMGFIVDVDQIAGRMPEK
LQMLVFSATIPEKLKPFLKKYMENPKFEQVAPRQIAAEKIEHILIPKRAREKIDVLHDAL
EAFNPYLAIVFANTKAMVEEIAAGLSAKGMKTARIHGDLSPRERAKTMKQIKNLEYRYII
ATDLAARGIDIEGVSHVVNYELPKDLTFYVHRAGRTARADLSGICATIYEPSDEFALTQL
EKMGIAFIYRDVRRGEWVELGDRNRRKKRVKKADKTETAARKAIGRPKKVKPGYKKKMER
QIEMLKKRQRKLQKRK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaacaaaatggaaagatttcggttttaaaccatttatcgaaaaagcgatcgaa
cataaaggctttgccgaaccgacggaaatacagcgaaaaatgatcccgcttgttttgcgt
ggggaaagtgccattggacagtcgcagacgggaacggggaaaacacatgcttatgtgcta
ccgctcttgcaaaaaacagacccgtctcttgcggaagtccaggcggtgattacggccccg
acgcgggaactggcggcacagatttaccatgaaattcaggaagtattaaaatgggaagaa
acaggccggataaccgccaaactgtttatcggcggaacggacaagcagcgtgatatcagc
aaactgaaaaaacagccgcaaattgtagtcggcacgccgggcagggtgaatgatcttgtg
aaagagcaggcgttgtttgtccatacagcaaaaacgtttgttgtcgatgaagcggatatt
atgctcgatatgggctttatcgtggatgtcgaccaaattgcggggaggatgcctgaaaaa
ctgcaaatgctcgtgttttcggcaaccattcccgaaaaattaaagccttttttaaaaaag
tacatggaaaatccgaaattcgagcaggtagcgccgcggcaaatcgcagcagaaaaaatt
gaacatattctgatcccgaaacgcgcgcgggagaaaattgacgtgttgcatgatgccctc
gaggcgtttaacccgtacttggcgattgtatttgcaaacacaaaagcgatggtggaagaa
attgccgcagggctctcggcaaaagggatgaaaacggcccgcatccacggagacctctcg
ccgcgggaacgggcgaaaacgatgaaacaaatcaaaaacctggaataccggtatatcatt
gccactgatctggccgcgcgcgggattgatatcgaaggggtcagccatgtcgtaaactac
gagctgccaaaagatttgacgttttacgtccaccgcgccggcagaacggcccgcgccgat
ctatcgggcatatgcgcaaccatttacgaaccttccgatgagtttgccctcacgcagctt
gagaaaatggggattgccttcatctaccgtgatgtgcgccgcggcgaatgggtggaactg
ggcgaccggaaccgccgcaaaaagcgtgtgaaaaaagcggataaaacggaaaccgcggcg
agaaaggcaatcggcaggccgaaaaaagtgaagccgggctataaaaagaaaatggaacgg
cagatcgaaatgctgaaaaaacggcaaaggaaattgcaaaaacggaaataa
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