Heyndrickxia coagulans 2-6: BCO26_1960
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Entry
BCO26_1960 CDS
T01527
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck03030
DNA replication
bck03410
Base excision repair
bck03420
Nucleotide excision repair
bck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCO26_1960
03410 Base excision repair
BCO26_1960
03420 Nucleotide excision repair
BCO26_1960
03440 Homologous recombination
BCO26_1960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bck03032
]
BCO26_1960
03400 DNA repair and recombination proteins [BR:
bck03400
]
BCO26_1960
Enzymes [BR:
bck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCO26_1960
DNA replication proteins [BR:
bck03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BCO26_1960
DNA repair and recombination proteins [BR:
bck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BCO26_1960
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCO26_1960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AEH54019
UniProt:
F7Z0J9
LinkDB
All DBs
Position
complement(1987787..1990453)
Genome browser
AA seq
888 aa
AA seq
DB search
MNGYSPFFREVLVLKKLILIDGNSIAYRAFFALPLLNNDKGIHTNAVYGFTMMLTKILEE
EKPTHILVAFDAGKTTFRHETYSEYKGTRQKTPPELSEQFPLIRELLDAHGIERYELENY
EADDIIGTLSKKAEEEGFTVKVISGDKDMTQLVSPKTTVMITRKGITDMEAYTPAHVEEK
YGLKPHQIIDMKGLMGDSSDNIPGVPGIGEKTAIKLLKQFPTVEELLSHIGEVSGKKLQE
KLEAHKEQALMSKELATIHRDIPLSISIEQAAYRHADPEKLRHLYQELGFKSMLEKMGGG
ARTEEKPALEAISFSIAEDITDNLFADVSSFYVEILDENYHTGEIIGFGLKNEKGLFFLR
AEDALASEAFKKWVEDESKIKHVYDAKRSIVALRRYGMELRGTGFDLLLVSYLLNPSDTV
EDFASVAKTHDYGNVETDEAVYGKGAKRKLPGEKRYAEHISRKAEAIDALCEPCTKALKD
NGQLELFEQLELPLSLILADMEYIGVKVDTDRLKEMGEEFKLRLHEIEQRIYSMAGTEFN
INSPKQLGAILFEKMGLPVIKKTKTGYSTSADVLEKLEPAHEIVREILHYRQLGKLQSTY
IEGLLKVVHRDGKVHTRFNQALTQTGRLSSTDPNLQNIPIRMEEGRKIRQAFVPSEEGWL
IFSSDYSQVELRVLAHISGDEKLIEAFREGMDIHTKTAMEVFHVKAEEVTPEMRRQAKAV
NFGIVYGISDYGLSQNLGITRKEAGEFIKRYFASYPRVKEYMDETVREAKQKGYVSTLLK
RRRYLPEISSRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMAKRLKKEKLRARLLLQV
HDELIFEAPEEEIEVLKEIVPEVMEHAVDLAAPLKVDSAYGPTWFDAK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaacggatattctccatttttccgggaggttttggttttgaaaaaattgattttaatt
gatggaaacagcattgcctacagagcgttttttgctttgccgcttttaaacaatgacaaa
ggcatacatacaaatgcggtgtacggctttacgatgatgcttaccaaaatattggaagaa
gaaaagccgacgcatattttggtggcgtttgatgccggcaaaacgaccttccgccacgaa
acatacagcgaatacaaaggaacgcgccaaaaaaccccgccggaactgtccgagcagttc
ccgctgatccgggaactgctcgatgcccacgggattgaacggtatgaactggaaaattac
gaagcggatgacattatcggcaccctgtcgaaaaaagcggaagaagaagggtttactgtt
aaagtcatttccggcgacaaagatatgacgcaactagtctcgccgaaaacaacggtcatg
attacacgtaaagggatcaccgatatggaagcctacacgccggcgcatgtcgaggaaaaa
tacgggttaaagccgcaccagatcatcgacatgaaagggctgatgggtgattcatccgat
aacattcccggcgtgccggggatcggggaaaaaacagccattaagctgttaaaacagttc
ccgacggtggaagagctgcttagccatatcggggaagtatctggaaaaaaactgcaggaa
aaattggaggcgcacaaagaacaggcgctgatgagcaaagaactcgccaccatccaccgc
gacattccgctttcgatttccattgaacaggcggcatacaggcacgccgacccggaaaaa
ttgcggcatttgtaccaggaattgggctttaaatcgatgcttgaaaaaatgggcgggggc
gcccggacggaagaaaaaccggcactggaagctatttctttttcaatcgccgaagacatt
acggacaacttgtttgcggatgtctcttctttttatgtggagatcctcgatgaaaattac
catacgggcgagatcatcgggttcggtttaaaaaacgaaaaagggctctttttcctccgg
gcggaagacgcacttgcttccgaagcgttcaaaaaatgggtggaagatgaaagcaaaatc
aagcacgtctatgatgcaaaacgttcgattgtcgctttgaggcggtacggcatggaactg
cgcgggaccggctttgacctgctgctcgtttcttatcttttgaatccttccgatacggtc
gaagattttgcttcggtggcaaaaacgcatgattatgggaatgtggaaaccgatgaggcc
gtctacggaaaaggcgcgaaacggaagctgcccggggaaaaacggtatgccgagcatatt
tcccggaaagcggaagcgattgatgccctttgcgaaccttgcacaaaagcgctcaaagac
aacggccagcttgaactgtttgaacaactcgagctcccgctgtcccttattctggcggat
atggaatacatcggcgtgaaagtcgatacggaccgtttaaaagaaatgggtgaagaattt
aaactccggctccatgagattgagcagcggatttacagtatggccggcactgaattcaat
atcaattcgccgaagcagcttggcgccattctttttgaaaaaatggggctgccggtcatt
aaaaaaacaaaaacgggatactccacgtctgccgatgtgctggaaaaattggaacctgcc
cacgaaatcgtcagggaaatccttcattaccggcagcttgggaaattgcagtccacctat
attgaggggcttttaaaagtggtccaccgggatggcaaagtccatacgcgttttaaccag
gctttgacgcaaaccggccgcctcagctcgacggatccgaatttgcaaaatatcccgatc
cgaatggaagaaggccggaaaatccgccaggcgtttgtcccgtcggaagaaggctggctc
attttttcgtcggattactcgcaggtagagttgcgggtgctcgcccatatttccggcgat
gaaaagctgattgaagcgttccgcgaaggcatggatatccacacaaaaacggcgatggaa
gttttccatgtaaaagcggaagaagtaacgcctgagatgcggcgccaggcaaaagcggtc
aacttcgggatcgtatacggcatcagcgactacgggctttcgcaaaatctcggcattacc
cgcaaggaagccggcgaatttatcaaacggtattttgcatcctacccgcgcgtcaaggaa
tatatggatgaaactgtcagagaagccaagcaaaaaggctatgtctccacccttttaaag
cggcggcgttacttgccggaaatttcaagccggaatttcaacttgcgcagttttgctgaa
aggacggccatgaataccccgatccagggaagcgcagccgatataattaaaaaagcgatg
atcgatatggcaaaaaggctgaaaaaagaaaagctgcgggcgcggctattgctgcaggtc
catgacgagctgattttcgaagcgccggaagaagaaattgaagtgctgaaagaaattgtg
ccggaagtgatggagcatgccgtagatctcgctgctcccctgaaagtggattccgcatac
gggccgacctggtttgatgcaaaatag
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