Heyndrickxia coagulans 2-6: BCO26_2008
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Entry
BCO26_2008 CDS
T01527
Symbol
yrhE
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck00630
Glyoxylate and dicarboxylate metabolism
bck00680
Methane metabolism
bck01100
Metabolic pathways
bck01120
Microbial metabolism in diverse environments
bck01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BCO26_2008 (yrhE)
09102 Energy metabolism
00680 Methane metabolism
BCO26_2008 (yrhE)
Enzymes [BR:
bck01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
BCO26_2008 (yrhE)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_6
Fer4_2
Fer4_7
Fer4_21
Fer4_10
Fer4_8
LdpA_Fe-S-bd
Fer4_9
Fer4_17
Fer4_15
Fer4_NDSU1
Fer4_18
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
AEH54067
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Position
2041473..2044415
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AA seq
980 aa
AA seq
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METKSIHITIDGRDYEARPGEKIIDVINRNDIFHPQICYYPEVDPIQTCDTCIAEVNGEL
MRTCSTAAEDGMVVRLSDDRSEAARHEAMDRILANHLLYCTVCDNNNGNCIVHNTTEKMG
IEHQKYPFTPKTDASGVDYSHPFYRYDPNQCIACGRCVEACQNLQVNETLSIDWEAERPR
VIWDNGVPINESSCVSCGHCVTVCPCNALMEKSMLGEAGYLTGLEEDLLNPMIDLVKKVE
PGYGSIFAISEIEASMREQRTKKTKTVCTFCGVGCTFEVWTKGRKILKIEPKHEGPVNAI
STCIKGKFGWDFVNSDKRLTKPLVRKDGKFVETSWDEALSVVASRLKEIHSQYGKDSVGF
ISSSKVTNEENYLMQKLARQVFETNNVDNCSRYCQSPATDGLLRTVGMGGDSGTIKDIAS
AGLVMIVGANPAEAHPVLATRIKRAHKLHGQKLIVADMRKNEMAERADLFIHPNQGTDQV
WLMAVTKYIIDQGWHDQKFIEEKVNFFDEFKETLEKYTLDYAEKITGIPKETLVQIAEMI
HQADGTCILWGMGVTQNTGGSDTSAAISNLLLATGNYARPGTGAYPLRGHNNVQGACDMG
TLPGWLPGYQHVEDDAAREKFEKAYDVKISNKPGLNNIEMLHEIAAGQLKAMYIIGEDMA
LVDSDANHVSEELSNLDFLVVQDVFFSRTAQYADVVLPAAPSLEKEGTFTNTERRVQRMY
QALPALGESKPDWWIIQEVAKRLGADWHYSHPGEIFAEMASLAPLFAQADYDKLEGWNSF
LWGSLDGANTPLLYKDGFPFPDGKARFALTDWVKPAEFPEQYDLHINNGRMLEQFHEGNL
TNKSEGIESKVPGVFVEVSPELAKERNLDTGDLVRVTSPFGSLKLHVLVTDRVQGNELYL
PMHSTEKESAINFLTGPIYDKRQSTPAFKQTKVKMELIQKGGKPPLPKTNHRDKKRNPTR
GVEVERKWQREGYQPLTDVR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaatcgattcacatcacgattgatggccgggattatgaagcccgccccggc
gagaaaatcatcgatgtgatcaaccggaatgatatttttcatccacaaatttgctattac
ccggaagtagatccaatccaaacttgtgacacttgtattgcggaagtgaacggggaactg
atgcgcacctgttcgacggcggcggaggacggcatggtggtccgcctcagcgatgaccgg
tcggaagcggcccggcatgaagcgatggacaggattctcgccaaccaccttttatactgt
acggtgtgcgacaataacaacggcaactgcatcgtccacaatacaacggaaaaaatgggc
atcgaacaccagaaatatccgtttacgccaaaaacggacgcaagcggggtcgactattcg
cacccgttttaccggtacgacccgaaccagtgcatcgcatgcgggagatgcgtggaagcc
tgccaaaatctgcaggtgaacgaaacgctttccattgactgggaagcagaacgcccgcgc
gtcatttgggataacggcgttccgatcaacgaatcgtcatgcgtttcctgcgggcattgc
gtcaccgtctgcccttgcaatgcattgatggaaaaatcaatgctcggcgaggcaggctat
ttaaccgggcttgaagaggacctgcttaacccgatgattgatcttgtgaaaaaagtcgaa
ccgggttacggcagcatttttgccatatccgaaatcgaagcttcgatgcgcgaacagcgc
acgaaaaaaacgaaaaccgtttgcaccttctgcggtgtcggctgcacatttgaagtatgg
acaaagggccggaaaattttaaaaatcgaaccgaagcatgaaggcccggtaaacgccatc
tccacttgcatcaaaggcaaattcggctgggattttgtgaattccgataagcggctgaca
aaaccgcttgtccgcaaagacggaaaatttgtagaaacgtcatgggatgaagcgctcagc
gtggtggcaagccggctgaaagaaatccattcccaatacggaaaagattccgtcggtttt
atttcttcttcaaaagttaccaatgaagaaaactatttgatgcaaaagctggcgcgccag
gtgtttgaaaccaacaatgtcgacaactgttcgcgctattgccagtcgccggcaacggac
ggcctgctcagaaccgtcggcatgggcggcgacagcggcacgattaaagatattgcgtca
gccggccttgtcatgattgtcggcgcgaacccggcggaagcccacccggtccttgcaacc
cgcatcaaacgggcccataaactgcacggccagaaactgattgttgccgatatgcgcaaa
aacgaaatggcagagcgcgccgatctttttatccatccgaaccagggcacagaccaggta
tggctgatggcggtgacaaaatatatcatcgaccagggctggcatgaccaaaaattcatc
gaggaaaaagtgaactttttcgatgaatttaaagaaacgcttgaaaaatacacgctcgac
tacgctgaaaagattaccggcatcccgaaggaaacgctggtccaaatcgccgaaatgatc
catcaggcagacgggacatgtatcctctggggcatgggcgtcacgcaaaatacaggcggt
tccgatacgtccgccgctatttccaatctgctccttgccaccggaaactacgcgcgccca
ggtacaggcgcttatccgttgcgcgggcataacaatgtgcaaggcgcatgcgatatgggc
acgctgccgggatggctgccgggctaccagcatgtggaggatgatgcggcacgcgaaaaa
tttgaaaaagcgtacgacgtcaaaatcagcaacaaaccggggctgaacaatattgaaatg
ctgcatgagattgcagccgggcagttaaaagccatgtatatcatcggcgaagacatggcg
cttgtcgactccgacgccaaccatgttagcgaggaactttccaatcttgactttcttgtc
gtccaggatgtctttttctcaaggacggcccaatatgcggatgttgttttgcctgcagcc
ccgtcgcttgaaaaagaaggcacctttacaaacacggaacgccgtgtgcaacggatgtac
caggcactcccggctttgggcgaatccaaaccggactggtggattatccaggaagtggca
aaacggctcggcgcagactggcattacagccacccgggcgaaatatttgccgaaatggcc
agcctggctccgctgtttgcacaggcggactacgacaaattggaaggctggaacagtttc
ctttggggaagccttgatggcgccaataccccgcttctttacaaggacggcttcccgttc
ccggacggcaaagcgcggtttgccctgacagactgggtaaaaccggctgaatttccggaa
caatacgatttgcatattaataacggccggatgctggaacagttccacgaaggcaacctg
accaataaatcggaaggcatcgaatcaaaagtcccaggtgtatttgtcgaagtgtcaccg
gagcttgcaaaagaacgcaatctcgacaccggagaccttgtccgcgtcacttccccgttc
ggatcgctgaaactgcatgtgctggttacagaccgcgtgcagggcaatgagctgtacttg
ccgatgcactcgacagaaaaggaatcggcgatcaacttcttaaccgggccgatttacgat
aaacggcaaagcacaccggcgtttaaacaaacgaaagtgaagatggaactgatccaaaaa
ggcgggaagccgccgctgccaaaaacaaaccaccgcgataagaaacgcaatcctacacgc
ggcgtggaagtcgaacggaaatggcagcgcgaaggctatcaaccattaacagacgtacgc
taa
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