Heyndrickxia coagulans 2-6: BCO26_2648
Help
Entry
BCO26_2648 CDS
T01527
Symbol
pcrA
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck03420
Nucleotide excision repair
bck03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCO26_2648 (pcrA)
03430 Mismatch repair
BCO26_2648 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bck03400
]
BCO26_2648 (pcrA)
Enzymes [BR:
bck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCO26_2648 (pcrA)
DNA repair and recombination proteins [BR:
bck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCO26_2648 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
BCO26_2648 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
PcrA_UvrD_tudor
UvrD_C_2
UvrD-helicase
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AEH54706
LinkDB
All DBs
Position
complement(2729343..2730830)
Genome browser
AA seq
495 aa
AA seq
DB search
MCVVGDNDQSIYRWRGADIANILSFEKDYPNAKVILLEQNYRSTKKILQAANKVIENNAN
RKKKNLWTENDEGQNLVYYRADSEQGEAQFVAGKIKELTASGKRRHSDIAILYRTNAQSR
VIEEVLMKSNIAYNIVGGTRFYDRKEIKDILAYLRVIANPDDDLSLARIINVPKRGIGQT
SLDKIVRYAADQEVSLFTVLQEIDFIGLSPKIAKACREFYELISNFTRMQEYLSVTELVE
ELLDKSGYRDALKLEKSLEAESRLENIDEFLSVAQEFEKENDDKSLVAFLTDLALVADID
RLEEDNAQKDAVVLMTLHAAKGLEFPVVFLIGMEEGIFPHSRSLMDEAEMEEERRLMYVG
VTRAQEELYLTNAEVRTLYGRMNINPVSRFINEIPEELIEDIRKEEKDRLDFRQVSRGKT
ERKEKRPPVVPAWQQNGAGNLSWQVGDKAEHKKWGIGTVVSVKGEGKSAELDIAFPSPVG
IKRLLAEFAPITKVE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtgttgtcggggataatgaccagtcgatttatcgttggcgcggtgcggatattgcc
aatatcctgtcatttgaaaaagattacccgaacgcgaaagtcattttgctcgagcaaaac
taccgctcaacgaagaaaattttacaggcggccaataaagtcatcgaaaacaacgcaaac
cggaaaaagaaaaatttatggacggaaaacgatgaggggcaaaatctcgtctattaccgg
gcggatagcgaacagggggaagcgcagtttgttgccggaaaaattaaggaactcactgca
tcgggcaaacgccggcactccgatattgcgattctataccgcacgaacgcccagtcccgt
gtcattgaagaagtattaatgaaatcgaacattgcctacaatatcgttggcggcacccgt
ttctacgaccggaaagaaattaaagatattcttgcgtatttgcgggtcatcgccaatccg
gatgacgacctcagcctggcccggattatcaatgtgccgaaacgcggtatcggccagact
tcattggataaaatcgtgcgatatgcggcggaccaggaggtttccttatttactgtcctt
caggaaattgattttatcggcctcagcccgaaaattgccaaagcctgccgggaattttat
gagcttatcagcaattttacccggatgcaggaatatttatccgttaccgaactggtggaa
gaattgctggacaagtccggctacagggatgcgctgaaactggaaaaatcgcttgaagcc
gaaagccggctcgaaaatatcgatgaatttctttcggttgcccaggaatttgagaaagag
aacgatgacaaaagccttgtcgcctttttgacggatttggcgcttgtcgccgatattgac
cggcttgaagaagataatgcacaaaaagatgctgttgtattaatgacattgcacgctgcc
aaagggcttgaatttccggttgtcttcctgatcggcatggaagagggcattttcccgcac
agccgttcccttatggacgaagcggaaatggaagaggaaaggcggctcatgtatgtcggc
gtcacgcgggcacaggaggagctgtacctgaccaatgccgaagtgcggacgctttacggg
cgcatgaatatcaatccggtttcacggtttatcaatgaaattccggaagaattgatcgag
gatattcgcaaggaggaaaaagaccggctcgattttcgccaggtttcgcgcggcaaaacg
gaaagaaaagagaaacggccgcctgttgttcctgcctggcaacaaaacggggccggcaat
ctttcctggcaagtgggcgataaagccgaacataaaaaatgggggatcggcacggttgtc
agtgtcaagggagaaggcaaatcagccgaacttgacattgcattcccgagccctgtcggc
atcaaacggcttttagccgagtttgcgccgattacaaaagtagaatag
DBGET
integrated database retrieval system
