Heyndrickxia coagulans 2-6: BCO26_2756
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Entry
BCO26_2756 CDS
T01527
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCO26_2756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bck03019
]
BCO26_2756
03009 Ribosome biogenesis [BR:
bck03009
]
BCO26_2756
Enzymes [BR:
bck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCO26_2756
Messenger RNA biogenesis [BR:
bck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCO26_2756
Ribosome biogenesis [BR:
bck03009
]
Prokaryotic type
rRNA helicases
BCO26_2756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEH54812
LinkDB
All DBs
Position
complement(2834927..2836354)
Genome browser
AA seq
475 aa
AA seq
DB search
MTKFSELNLSPAILKAVKRMGFEEASPIQAATIPLTMQGKDIIGQAQTGTGKTAAFGIPL
IEKIDHRSRNIQGIIIAPTRELAIQVSEELYRIGQYSRVHVLAVYGGQDISRQIRALKNH
PQIIVGTPGRILDHIHRGTLKLDHVHTLVLDEADEMLNMGFIDDIEAILSTVPKDRQTML
FSATMPDPIRKIAERFMNNPELVRVKAKEMTVPSIEQYYIKVQEREKFDVLSRLLDVQSP
DLAIVFGRTKRRVDELANALTLRGYLAEGIHGDLSQAKRLSVLRKFKDGKIDVLVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGREGMAMTFVTPREMGYLKTVEQTTK
KRMLPMRPPTWDEAFEGQQRVTMERIGETIKEGNIDEYMSVAKELLAEYDPAEVTAAALK
LMTKEPDKTPVHISEERPLPHKKDHSRRGKPAGSYKGSYNKGRKPRRTTTNRKPF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaagttttcagaattaaatttaagcccggcgattttaaaagctgtgaaaagaatg
ggatttgaagaggcatcgccgattcaggcagctaccattccgctcaccatgcaagggaag
gatattatcggccaggcgcagacaggtacgggaaaaactgcagcatttggcataccgtta
attgaaaagattgatcatagaagccgtaatattcaaggaatcattatcgcgccaacacgc
gagcttgccattcaggtatctgaagaattgtaccggatcggccagtattcgcgcgttcat
gtgctggctgtttatggcggtcaggatatttcgcgtcagatccgtgcgctgaagaaccat
ccgcaaattattgtcggaacaccgggacggattcttgaccatatacaccggggaaccttg
aaactcgaccatgtgcatacgcttgtgcttgacgaagcggatgaaatgttgaatatgggc
tttattgatgacattgaagccattctttccaccgtgccgaaagaccgccaaacgatgctg
ttctcggcaaccatgccggatccgatccggaaaattgccgaacgcttcatgaacaacccg
gaacttgtccgtgtgaaagcaaaagaaatgaccgttccgtctattgaacaatactacatt
aaagtccaggaacgtgaaaaattcgatgtattgtcaaggcttttggatgtacagtctccg
gaccttgcgattgtgtttgggcgcacgaagcggagagttgatgaactggcgaatgccctg
accttgcgcggctatcttgcagaaggtattcacggtgatttgagccaggcgaaacgctta
tcggtactccgaaagtttaaagacgggaaaattgatgtgcttgttgccaccgatgttgcg
gcacgcgggctggatatctcgggtgtaacccatgtttacaattacgatattccacaggac
ccggaatcctatgtgcaccggatcggaagaacgggccgtgccggacgtgaaggtatggcg
atgacctttgtcacgccgcgggaaatgggctatctcaaaacggttgaacagacaacgaaa
aagagaatgctcccgatgcgcccgccgacctgggatgaagcgtttgaagggcagcagcgc
gtcaccatggaacggatcggggaaaccatcaaagaaggcaatattgatgaatatatgtcg
gtagcgaaagagttgcttgcagaatatgacccggctgaggtcacggcagctgctttgaaa
ctgatgacgaaagagccggataaaacaccggttcatatttcagaagaacggccgcttccg
cataaaaaagaccatagcagacggggcaagcctgcagggtcctacaaagggtcttacaat
aagggaagaaagccgagaagaacaacaacaaaccgcaaaccattttaa
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