Heyndrickxia coagulans 2-6: BCO26_2816
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Entry
BCO26_2816 CDS
T01527
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCO26_2816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bck03021
]
BCO26_2816
03019 Messenger RNA biogenesis [BR:
bck03019
]
BCO26_2816
Transcription machinery [BR:
bck03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BCO26_2816
Messenger RNA biogenesis [BR:
bck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BCO26_2816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
AAA_22
ATPase_2
NACHT
AAA
AAA_25
DUF6417
Motif
Other DBs
NCBI-ProteinID:
AEH54872
LinkDB
All DBs
Position
complement(2895691..2896971)
Genome browser
AA seq
426 aa
AA seq
DB search
MESLSISSLENMTLKELYALAREYKVSYYSKLTKKELIFAILKARAEQEGYFFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGQNPETAKERVHFPALTPLYPNRQIILETAPEKLSTRIMDLITPVGFGQRGLIVAPPK
AGKTMLLKEIANSITVNHPDAELIVLLIDERPEEVTDIERSVHADVVSSTFDEVPENHIK
VAELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAEKRVFPAIDIR
RSGTRKEELLLSKDHLEVLWAIRKSMSDSPDFVEKFLRKLKQSKTNDEFVEMIKADLKVS
SSRRVI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtttatcaatatcaagtctggaaaatatgacgttaaaagagctttatgccctt
gcaagagagtataaagtatcctactacagcaaactgacgaaaaaagagttaatttttgcg
attttaaaagcacgggcagagcaagaagggtatttctttatggaaggcgtgctcgaaatc
atccagtcggaaggattcggattcctgcgcccgatcaactactccccaagttcggaggac
atttatatttctgcttcgcaaatccgccgctttgatttaagaaacggcgataaggtttcc
ggcaaagtccggccgccgaaagaaaacgaacgttattacggcttgctgcatgtggaagcg
gtaaacggccaaaacccggaaaccgctaaggaacgggttcattttccggctctgacgccg
ctttatccgaaccggcagattatccttgaaacggctcccgaaaaactgtccacccggatt
atggatttaatcaccccggttggtttcggacagcgcggtttgattgtggcgccgccgaaa
gccggtaaaacgatgctgctgaaagaaattgccaactctattaccgtgaaccatcctgat
gcggaattgatcgttctgttgattgatgaacggccggaagaagtaacagatattgaacgt
tccgtgcatgcggatgtcgtcagctcgacctttgacgaagtgccggaaaaccatatcaag
gttgcggaactcgtattggaaagagcgatgcgccttgtcgagcataagcgcgatgtcgtc
attttaatggacagcattacgcgcctcgcacgcgcctataaccttgtgattccgccgagt
gggagaacgctttcaggcgggattgacccggctgcgttccatcgtccgaaacggtttttc
ggggcggcacgtaatattgaagaaggcggcagcctgacgattttggccaccgcgctggtc
gataccggttcacgcatggatgatgtgatttatgaagaatttaaaggcaccgggaacatg
gagctccatcttgaccgctccctcgccgaaaagcgcgttttcccggccatcgacatccgc
cgttccggtacaaggaaagaagaactgctgctttcgaaagaccatctcgaagtactgtgg
gcgatccgcaaatcgatgtccgattctccggattttgtcgaaaaattcttgcgcaagctg
aaacaatccaaaacaaacgacgagtttgtggaaatgatcaaagcagacttgaaagtatca
tcgtcaaggcgtgtaatataa
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