Heyndrickxia coagulans 2-6: BCO26_2971
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Entry
BCO26_2971 CDS
T01527
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bck
Heyndrickxia coagulans 2-6
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bck03016
]
BCO26_2971 (trmE)
Transfer RNA biogenesis [BR:
bck03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BCO26_2971 (trmE)
Prokaryotic type
Methyltransferases
BCO26_2971 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
GTP_EFTU
AIG1
Ras
MMR_HSR1_Xtn
Roc
cobW
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEH55027
LinkDB
All DBs
Position
complement(3069018..3070403)
Genome browser
AA seq
461 aa
AA seq
DB search
MEMDTIAAISTPMGEGAISIVRLSGENAISIANRLFAGVGGKKLADVPSHTIHYGKIVDP
DTAETIEEAMVSVMKAPKTFTREDVVEINCHGGLVAVNRVLQLVLKNGARLAEPGEFTKR
AFLNGRIDLSQAEAVMDLIRAKTDKAMNVAIGQMEGRLSKLVKKLRQEILEVVAHIEVNI
DYPEYDDVEEMTHRMLEERAQYIKNEIEKLLRTAHQGKILREGLSTAIIGRPNVGKSSLL
NSLVQENKAIVTDIPGTTRDVIEEYVNVRGVPLRLIDTAGIRETEDIVERIGVERSRKAL
KEADLILLVINSSEPLSPEDKALFEAVEGMDVIVILNKWDLPHQVEMESVRQLAQGAKIL
TTSLVTEEGMEKLEDAIAAMYFEGQMETGDLTYVSNSRHIALLNQALEAIQDVQNGIQSN
TPIDIIQIDLTRTWDLLGEIIGDTVQESLLNQLFSQFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatacaattgcggcgatctcgacgccgatgggagagggagcgatttcgatt
gtccggctgagcggcgaaaatgcgatttcgattgcgaatcgattatttgcaggtgtcggc
gggaaaaaactggcggatgtcccttcgcacacgatccattacgggaaaattgtcgacccg
gacactgccgaaaccattgaggaagcgatggtgagcgtgatgaaagcgccgaaaacgttc
acgcgcgaagatgtcgtggaaatcaactgccatggtgggctcgtcgctgtaaaccgggta
ttgcagctcgttttaaaaaatggtgcgcgccttgccgagccgggcgagtttacaaaacgg
gcgtttttgaacggacgcattgatctgtcgcaggcggaagcagtcatggatttaatccgc
gctaaaacggacaaagcgatgaacgtggcgatcggccagatggaaggcaggttgtcgaaa
ctggtcaaaaagctgcgccaggaaatattggaagtcgtcgcgcatattgaagtcaatatt
gattatccggaatacgacgatgtcgaagaaatgacgcaccgcatgctggaagagagagcg
cagtacattaaaaatgaaattgaaaaactgttgcggacagcgcaccagggaaaaattttg
cgggaagggttgtcaacggccattatcggccgcccgaatgtcggaaaatcatcattgtta
aacagccttgtccaggaaaataaggcaatcgtcaccgatattcccggcacgacacgcgat
gtgatcgaagaatacgtcaatgtccgcggtgtgccgctgcgcctgattgacaccgcaggc
atccgcgaaacagaagatatcgtagaacgaattggtgtggaacgttcgcggaaagcgctc
aaggaagcggatttgattttgcttgttatcaactcatccgagccgctcagcccggaagat
aaggcattgtttgaagctgtggaaggcatggatgtgattgtcatcttaaataagtgggac
ctgccgcatcaagtggagatggaaagcgtccgccaacttgcgcaaggcgcgaaaatcctc
accacgtcccttgtaacagaggaaggcatggagaaattggaagatgcgattgctgcgatg
tattttgaagggcagatggaaacaggcgacctgacatatgtttcaaacagccgccatatt
gcgcttttgaaccaggcattggaagccattcaagatgtgcaaaacggcattcaatccaac
accccgattgatattatccaaatcgacctgacccggacatgggacctgctcggcgaaatc
atcggcgacaccgtccaggaaagcttgttgaaccaactcttctcccaattctgcctcggg
aaataa
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