Shouchella clausii: ABC0052
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Entry
ABC0052 CDS
T00228
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit HolB
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bcl
Shouchella clausii
Pathway
bcl03030
DNA replication
bcl03430
Mismatch repair
bcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABC0052 (holB)
03430 Mismatch repair
ABC0052 (holB)
03440 Homologous recombination
ABC0052 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcl03032
]
ABC0052 (holB)
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC0052 (holB)
Enzymes [BR:
bcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABC0052 (holB)
DNA replication proteins [BR:
bcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABC0052 (holB)
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABC0052 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DeoRC
Motif
Other DBs
NCBI-ProteinID:
BAD62595
UniProt:
Q5WLY0
LinkDB
All DBs
Position
69377..70375
Genome browser
AA seq
332 aa
AA seq
DB search
MRHVDTWKDWQEAQPQVVPMLVASIQKNRLAHAYLFEGEAGSGKHEVALLMAKRFFCKEH
NGAEPCHACSDCLRIEHGNHPDVHQVAPDGQSIKKEQIEYLQKEFTYRGMESAAKVYIVS
HVDKMTASAANSLLKFLEEPQGQTLAILLTENGASILPTIRSRAQQMRFLPPSQTQIASK
LVAEGIEENQALFLAALTGNKAYAKALAEGDWSFQARTVVLQLMHELFTRPDLAAITLAD
KWIPLMKERLQQEMGLEMMLLWLRDLLYIQAGKQDKLVYADNKSKFDELALSTSQHTIRA
AMSHVLEAKRHLSANVSIQLVMERLLFTIQEG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgagacacgtggatacatggaaagactggcaagaggcacagccgcaggttgtgcctatg
cttgttgcgagcattcaaaaaaaccgcttggcccacgcctacttgttcgaaggggaagcc
ggaagcggcaaacatgaagtggctttgttgatggcgaaacgttttttctgcaaggaacac
aacggggcagagccgtgccatgcatgcagtgactgtttgcggattgaacatggcaaccac
cctgatgtccaccaagtcgcaccggacggacaatcgattaaaaaagaacagatcgaatac
ttacaaaaagaatttacgtacaggggcatggagtctgctgcaaaagtgtatatcgtctcc
cacgtggataaaatgaccgcaagcgctgcaaatagtttattgaagtttctggaagagcca
caaggccaaacattggcgatccttttgacggaaaacggcgcaagcattttgccgacaatt
cgctcccgcgcccaacaaatgcggtttttgccgccttcgcaaacgcaaatagcaagcaaa
cttgttgccgagggaatcgaagaaaatcaggcattgtttttggctgctttaacaggaaac
aaagcttacgcgaaggcactagccgagggagactggtcttttcaagcaagaaccgtagtg
ttacaattgatgcatgagctttttacaaggccagaccttgctgcaatcacacttgctgat
aagtggattccgcttatgaaggagcggttgcaacaagaaatggggcttgaaatgatgtta
ctttggttaagagaccttttatatatacaggctggaaagcaggataagcttgtctatgct
gacaacaaaagcaaatttgatgagctggcgctttctacatcacagcacaccattcgcgca
gcgatgagccatgtgcttgaagcgaaaaggcatcttagcgccaacgtttccatccaacta
gtgatggaacggctgcttttcaccatacaggagggctaa
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