Shouchella clausii: ABC0473
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Entry
ABC0473 CDS
T00228
Name
(GenBank) hypothetical protein
KO
K06236
collagen type I alpha
Organism
bcl
Shouchella clausii
Pathway
bcl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
ABC0473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bcl00536
]
ABC0473
Glycosaminoglycan binding proteins [BR:
bcl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
ABC0473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Phage_T7_tail
Motif
Other DBs
NCBI-ProteinID:
BAD63014
UniProt:
Q5WKU1
LinkDB
All DBs
Position
complement(526227..528872)
Genome browser
AA seq
881 aa
AA seq
DB search
MATESEENKNLKRLNLHLSQFLINILINIITPRPSRRGPTGPTGPTGPTGVTGPTGDTGP
TGVTGPTGGTGPTGVTGPTGTTGPTGDTGPTGDTGPTGDTGPTGPTGTTGDTGPTGVTGP
TGTTGPTGDTGPTGVTGPTGATGPTGNTGPTGVTGPTGTTGPTGGTGPTGDTGPTGGTGP
TGVTGPTGVTGPTGTTGPTGDTGPTGVTGPTGVTGTTGDTGPTGVTGPTGDTGPTGPTGT
TGTTGDTGPTGVTGPTGVTGPTGVTGPTGDTGPTGVTGPTGDTGPTGNTGPTGVTGPTGD
TGPTGDTGPTGVTGPTGATGPTGDTGPTGDTGPTGDTGPTGGTGPMGVTGPTGVTGPTGD
TGPTGDTGPTGDTGPTGVTGPTGDTGPTGDTGPTGVTGPTGVTGPTGVTGPMGDTGPTGD
TGPTGNTGPTGDTGPTGGTGPTGVTGPTGVTGPTGDTGPTGDTGPTGGTGPTGVTGPTGD
TGPTGGTGPTGVTGPTGVTGTTGDTGPTGDTGPTGVTGPTGDTGPTGDTGPTGDPGPTGP
TGPTGDTGPTGVTGPTGVTGTTGDTGPTGDTGPTGDTGPTGVTGPTGVTGTTGVTGPTGD
TGPTGDTGPTGVTGPTGVTGTTGTTGTTGDTGPTGDTGPTGVTGPTGATGPTGDTGPTGV
TGPTGVTGPTGPTGPTGVTGTTGATGTTGATGTMGATGPTGPTGPTGPTGGTGPTGVTGP
TGPTGPTGPTGATGPTGTFPAGYGYTFNTGAQTVVSGGDVIFSTNGPFSGGVTHTPGTPS
ITIANGGDYQISYEVNVLVSGGETALAYAIVMNGTVQNSTRYGQIGGQNNTTRLAIGPSI
LTIPNGSTITLRNIGATTHTLVTATDGVTIVNAALRLIRIS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggaaagtgaagaaaataaaaacttaaaaagattaaatctccacttgagccag
tttcttataaatatattaattaatattattacccccaggccctctagacgtggacctacg
gggccaactggacccacgggacccacaggcgtgacagggcccacgggagacacggggccg
actggcgtgacaggacctacgggaggcacaggaccgaccggcgttactggacccacggga
accacggggccgactggagataccggacctacgggagacacggggcctacaggagacacg
gggccgactggacctacgggaaccacgggggacaccgggcccacgggcgtgacaggacct
acgggaaccacggggccgactggagataccggacccacgggtgtgacaggtcccaccggc
gcgacggggcctacaggaaacacggggcctacaggagttacgggacctacgggaaccacg
gggcctacaggaggcaccggaccaactggggataccggacccacggggggcacaggaccg
accggcgttactggacccacgggcgtgacaggacctacgggaaccacggggcctacggga
gataccggacctacgggcgtgacagggccaaccggggttacgggaaccacgggggacact
ggaccgacgggagtcaccgggccaacaggagataccgggccgacaggacctacgggaacc
acgggaaccacgggagataccggacccacaggcgtgacagggcccacgggagtcacgggg
cccacgggagtcacgggaccaacaggagacactggacccacaggcgtcacggggccaacc
ggagacaccgggcctactggcaataccgggcccacgggcgtgacaggacccacaggagac
accgggcctactggagataccggacccacgggtgtgacagggcccaccggcgcgacgggg
cctacaggagacacggggcctactggcgataccggacccacgggagataccggacccacg
gggggcacgggacctatgggggttacggggccgacgggagtcaccgggccaacaggagac
acgggaccaactggggatacgggaccgactggagataccgggccaacaggagtcactgga
ccaactggggatacgggaccgactggagataccgggccgacgggcgtgacaggacctaca
ggcgtgacaggacccacgggcgtcacggggcctatgggcgataccggaccgactggggat
accggacccacgggaaataccggacctacgggagataccgggcccacggggggcacaggg
cctacaggagttacgggacccacgggagttacgggacccacgggagataccggacctact
ggagataccgggcccacggggggcacagggcctacaggagttacgggacctacgggagac
acggggcctacgggaggcacaggacccactggcgtcaccgggccgactggcgttacggga
accacgggagataccggacccacgggagataccggacctacgggcgtcacggggccgaca
ggagacactgggccgacaggagacaccggacctactggggatcccggacctactggaccc
acggggcctacgggagataccggacctacgggcgtgacagggcctaccggggttacggga
accacgggggacactggaccgacgggagataccggacccacgggagataccggacctacg
ggcgtcacagggccgacaggcgttacgggaaccactggcgtcaccgggccgacaggagac
acggggcccacgggagatacgggacctacgggcgtgacagggcctaccggggttacggga
accacgggaaccacgggaaccacgggagataccggacctacgggagataccggacccacg
ggtgtgacaggtcccaccggcgcgacggggccaacaggagataccggacctacgggagtc
acaggacccactggcgtcaccgggccgacaggacctactggacctacgggagtcacggga
accacgggcgcgacgggaaccacgggcgcgacgggaaccatgggcgcaacagggcccacg
gggcccacaggacccactggaccgactggtggcactggacccacgggcgtgacgggaccc
acggggccgacgggacctacaggacccacgggcgccacgggtccaactggtacttttcca
gcaggctatggttatacctttaatactggagcacaaactgtggtttcgggtggagatgta
attttcagtacaaatggacccttttctggcggagttacccacacgcctggcactccatca
attaccatagcaaatggtggcgactaccaaatttcgtatgaagttaacgtattggtttct
ggaggagaaactgccttagcctatgcaatagtcatgaatggtacagtccaaaattcaacc
cgttacggtcaaatcggtggtcaaaataatacaacaaggttagcgatagggccttccata
ttaacgataccaaatggatcgaccataacacttcgtaatattggggcaactacccataca
ttagttacagcaaccgatggagtaacgattgttaatgcggcgttaaggttaataagaatt
agttag
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