Shouchella clausii: ABC0882
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Entry
ABC0882 CDS
T00228
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bcl
Shouchella clausii
Pathway
bcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABC0882 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcl03019
]
ABC0882 (groEL)
03110 Chaperones and folding catalysts [BR:
bcl03110
]
ABC0882 (groEL)
03029 Mitochondrial biogenesis [BR:
bcl03029
]
ABC0882 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bcl04147
]
ABC0882 (groEL)
Enzymes [BR:
bcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABC0882 (groEL)
Messenger RNA biogenesis [BR:
bcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABC0882 (groEL)
Chaperones and folding catalysts [BR:
bcl03110
]
Heat shock proteins
HSP60 / Chaperonin
ABC0882 (groEL)
Mitochondrial biogenesis [BR:
bcl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABC0882 (groEL)
Exosome [BR:
bcl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABC0882 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
ABC0882 (groEL)
Exosomal proteins of breast cancer cells
ABC0882 (groEL)
Exosomal proteins of colorectal cancer cells
ABC0882 (groEL)
Exosomal proteins of bladder cancer cells
ABC0882 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAD63421
UniProt:
Q5WJN4
LinkDB
All DBs
Position
956790..958427
Genome browser
AA seq
545 aa
AA seq
DB search
MAKDIQFSEEARRSMLKGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVTSGANPMGIRKGIE
KATAAAVKELKAISKPIEGRESIAQVAAISSADEEVGQIIAEAMERVGNDGVITIEESKG
FSTELEVVEGMQFDRGYASPYMVSDSDKMEAVLDNPYVLITDKKITNIQEVLPVLEQVVQ
QSRPVLIIAEDVEGEALATLVLNKLRGTFNAVAVKAPGFGDRRKAMLEDIAILTGGQVIT
EDLGLDLKSATIESLGRAAKVVVTKENTTIVEGAGDPEQISGRVNQLKAQVEETTSEFDK
EKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV
IKAVKAVDATGDEATGVNIVLRALEEPVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATG
EYVNMVETGILDPVKVTRSALQNAASVSAMFLTTEAVIADKPEENAGGADMGGMGGMGGG
MPGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatattcaatttagtgaagaagcgcgccgttccatgcttaaaggcgtagat
actcttgcaaatgcagtaaaagtaacgcttgggcctaaggggcgcaacgttgttctagaa
aagaaattcggttcaccactcatcaccaatgacggtgtgacgattgcaaaagaaatcgaa
cttgaagatgcttttgaaaatatgggcgctaagctggttgctgaagtagcaagcaaaacg
aatgatattgctggtgacggaacaacgactgcgacagtccttgcacaagcaatgatccgt
gaaggcttgaaaaacgttacttccggtgcaaacccaatgggcatccgcaaaggaattgaa
aaagcaacggctgctgcagtgaaagagcttaaagcaatttcaaaaccaatcgaaggcaga
gagtcgattgctcaagttgcggcgatttcttctgctgatgaagaagtagggcaaatcatc
gcggaagcaatggaacgtgtcggcaacgatggcgttattacaattgaagaatcaaaaggt
ttctcaacagaacttgaagtagtagaaggtatgcaatttgaccgtggctatgcttctcct
tacatggtgtctgactcagacaaaatggaagcagtcctcgacaacccatacgttcttatt
acagacaaaaaaatcacgaatatccaagaagtgcttcctgtacttgaacaagtggtacag
caaagccgtccagttttaattattgctgaggatgttgaaggggaagcgcttgcgacactt
gtattgaacaagcttcgcggtacatttaatgctgtagctgtaaaagctccaggatttggc
gaccgtcgcaaagcgatgcttgaagacattgccatccttactggtggccaagtgatcact
gaagaccttgggcttgatttgaaatctgccacaatcgaatcgcttggacgcgcagcaaaa
gtcgttgtaacaaaagaaaacacaacgattgttgaaggtgctggcgacccagaacaaatt
tctggccgcgtcaaccaattgaaagcgcaagtagaagaaacgacttctgaatttgataaa
gaaaaactacaagagcgtcttgctaaacttgctggcggcgtcgctgttcttaaagtaggc
gcagctactgaaacagaaatgaaagaacgcaagcttcgcattgaagacgccctaaactct
acacgtgctgctgtagaagaaggcatcgttgctggtggcggtacagcacttgtcaacgtg
attaaagcagttaaagcagttgacgctacaggggacgaagcaacaggcgtgaacattgtg
ctccgcgctcttgaagagccagttcgccaaattgcccacaacgctggtcttgaaggctct
atcatcgtagagaagctaaaagctgaagaggttggcgttggctacaatgcggctacaggc
gaatatgtgaacatggttgaaacgggcattcttgacccagtaaaagtgacgcgttctgct
ctacaaaacgcagcaagtgtttccgcaatgttcctcaccactgaagctgttatcgctgat
aagccagaagaaaatgctggcggcgctgacatgggcggcatgggaggaatgggcggcgga
atgcctggcatgatgtaa
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