Shouchella clausii: ABC1086
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Entry
ABC1086 CDS
T00228
Symbol
pcrA
Name
(GenBank) UvrD/REP family ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcl
Shouchella clausii
Pathway
bcl03420
Nucleotide excision repair
bcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABC1086 (pcrA)
03430 Mismatch repair
ABC1086 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC1086 (pcrA)
Enzymes [BR:
bcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABC1086 (pcrA)
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABC1086 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ABC1086 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAD63624
UniProt:
Q5WJ31
LinkDB
All DBs
Position
1176616..1178871
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AA seq
751 aa
AA seq
DB search
MSDMQDTIIERMLSELNPEQQKAVTHSNGPLLLMAGAGSGKTRVLTYRISYLLRRHSTPP
WAVLALTFTNKAAREMKDRVAQLVGPIAEDIWISTFHSMCVRMLRRDIDRIGYSRNFTIL
DSSDQLSVIKQILKSQNVDPKKFDPKAILGMISAAKNELQTASKFAQIASGVFEQVAADV
YSEYEKRLKQNNALDFDDLIMKTIQLFNEVPEVLDFYQRKFQYIHVDEYQDTNKAQYRLV
KLLGDRLQNICVVGDSDQSIYRWRGADIQNILSFEKDYPDATVILLEQNYRSTKTILKAA
NSVIANNGNRKPKNLWTENDEGAKISVYEAATEQAEAQFVVEKIKEAAAEPGFSYKDVAI
LYRTNAQSRIIEEYFVKSNLDYNIVGGTKFYDRKEIKDVLAYLRLVANPDDDISLQRVVN
VPKRGIGATTVDKIAAYADAHGLSMFKALGELEQIGVTARARTKLVEFRDQVNNWVHMQD
YLSVTELVEELLDKTGYREMLKNEQTIEAQSRLENIDEFITVTQEFEKRSEEKDLVSFLT
DLALVADIDQLDKDEEATKKEAITLMTLHSAKGLEFPYVFLIGMEEGVFPHSRSLFEEEE
MEEERRLAYVGITRAEKRLYLTSAKMRTLYGRTNTNPTSRFIAEIPAELIEEDSQMPAWG
TGGSRQPAAASAAARVRSSVFAGKSGSPRVTVTGGESFDWSVGDKAVHKKWGTGTVVSIK
GEGDSIELDIAFTPPTGVKRLFAKFAPITKA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacatgcaagatacaataattgaacggatgctatctgagttaaaccctgagcaa
caaaaagctgtgacccattcgaacgggcctttgctgttaatggcgggtgcaggaagcggc
aaaacccgtgtgctgacttaccggatcagttatttgctccggcgccattcgacgccgcct
tgggctgttctcgccctcacattcacgaacaaagcagcgcgagaaatgaaagacagggtg
gcccagttggttggaccaatagctgaagatatttggatttccactttccattcgatgtgc
gtgcggatgttgcgccgtgatattgaccggatcggctacagccgcaattttacgattttg
gattcatctgaccagctttcggtcataaagcaaattttgaaaagccaaaacgtcgaccct
aagaaatttgacccaaaagcgatattagggatgatttctgctgctaaaaacgaattgcaa
acggcaagcaaatttgcgcaaatcgcttcaggcgtatttgagcaagtagcggccgacgtg
tatagtgaatatgaaaaacgattgaaacaaaacaacgcacttgactttgatgatttaatt
atgaagacgatccaattgtttaacgaagtgccggaagtgctcgatttttaccaacgcaaa
ttccagtacattcatgttgatgaatatcaagatacaaacaaagcacaataccgccttgtg
aaactccttggtgaccgtctgcaaaacatttgcgttgtcggcgattccgaccaatcgatt
taccgttggcgcggagccgatattcaaaatatcctctcctttgaaaaagactacccggat
gcgactgtcattttgcttgaacaaaactaccgttcgacaaaaacgattctgaaagcggcc
aacagtgttattgctaacaatggcaaccgcaagccaaaaaacctttggactgaaaatgac
gaaggagcgaaaatcagcgtatacgaggcggctacagaacaagctgaagcacagtttgtc
gtcgaaaaaataaaagaagcagcagcagaaccaggattttcttacaaagatgtggcgatt
ctgtacagaaccaatgcccaatcgcgtattattgaggaatattttgtgaaatctaatctc
gactacaatatcgtcggcggtactaagttctatgaccgcaaagagattaaagacgtcctt
gcttacttgcgcttagttgccaaccctgatgatgacattagcttacagcgtgttgtcaat
gtgcctaagcgtggcattggtgcgacgacggtagacaagatcgctgcttatgctgatgcc
catgggctctcgatgttcaaagcgcttggggaactggagcaaatcggcgttacggccaga
gcgcggacgaaacttgtggaatttcgcgaccaagtgaataactgggtgcacatgcaagat
tatctttccgtgacagagctagtggaagaattgcttgataaaaccggttatcgcgaaatg
cttaaaaacgagcagacgattgaagcacagtctcggcttgagaacatcgacgaatttatt
acggtcacccaagagtttgagaagcggagcgaagaaaaagatctcgtgtctttcttgacg
gacttagcccttgttgccgatattgaccaactcgataaggacgaggaagcgacaaaaaaa
gaggccattacgctgatgacgcttcattcagcaaaaggacttgaattcccatatgtcttt
ttgattggaatggaggaaggggtgttcccacatagccgttccttgtttgaggaagaagaa
atggaagaggagcggcgcctcgcctatgttggcattacccgtgccgaaaaacggctctat
ttgacgagtgccaaaatgaggacgctctatggccgaacgaataccaacccgacttcccgc
tttattgctgaaatcccggctgaattgattgaagaagacagtcaaatgcccgcttgggga
acagggggttctaggcagccagccgccgcaagtgcagctgcccgtgtacgctcaagcgtc
tttgcaggcaagagcggatcgccacgagtaacagtaacaggcggagaaagttttgactgg
tcagtcggcgacaaagcggtccataaaaaatggggaacaggaacagtcgtcagcataaaa
ggagaaggggattccatcgagctggacatcgccttcactccgcctacgggtgtaaagcgg
ctatttgccaaatttgcgcctatcacgaaagcttag
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