Shouchella clausii: ABC1252
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Entry
ABC1252 CDS
T00228
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcl
Shouchella clausii
Pathway
bcl03420
Nucleotide excision repair
bcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABC1252
03430 Mismatch repair
ABC1252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC1252
Enzymes [BR:
bcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABC1252
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABC1252
MMR (mismatch excision repair)
Other MMR factors
ABC1252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
AAA_22
AAA_30
AAA_11
DEAD
ResIII
NACHT
nSTAND3
Mg_chelatase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAD63790
UniProt:
Q5WIL5
LinkDB
All DBs
Position
1365029..1367056
Genome browser
AA seq
675 aa
AA seq
DB search
MSIFEAEEAQLQATLARLDELGDKLEQVPRYRGSDFTEQVLEDRREHLRTALHSARQEPY
FGRLDFCEWDQETKALYIGKVGVHDEDSGDPFVIDWRAPVASLFYSFTGSEEDVFYQSPE
GIVEGEILLKRNIVIRNRRLQRVVDSYAKGQEMSGGDEFLLYKLSEQKDNKLKDIVATIQ
AEQNAIIRHAIKEPLIIQGAAGSGKTTVALHRLAYLLYEFREQLRAEKMVIFAPNAMFLD
YISHVLPELGVGTIAQSTFANWGLSVLGSSYQLYDTKKRLANQFESKLEQQSEDVLAYKG
SLACQKQMRRFIDAYVGERVPKKDFCPWDGCVLNKETMKQWIEQDFAASPPMKRRERFHA
RAKRWIEIEAKRFEDKKEQQAFKSEALKRLRSFLSYWSKPDLAKLYTAFLKEQQLPVPAS
LKEKRLGYEDIAPLVYMHQQLYGIERDARFDHVVIDEAQDVSPFMLAVLKERTRAGGFTI
LGDLAQGIHGDEGISNWAAFEEVFANNVSYVQMERSYRSTMEIIEFSNRILQQMAFAPAP
AKPVFRSGQDVVVEQRPTEHVAHWVKAMQDKQTQTIAVLTRTEKASTAICRQLQAAGFDA
HLLIAGGERYEGGISVLPVYLSKGFEFDAVLLTDVTNDHYPCDELHKKLLYVGCTRALHE
LTVWYDGALSPILAP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtccatatttgaagccgaagaggcgcagttgcaggcgacgcttgcccgactggatgaa
ctaggcgataagctggagcaggtgccgcgctaccgcgggagcgattttacggaacaagtg
ctggaagataggcgtgagcatttacgtacagcgcttcattcagccagacaagaaccgtat
tttggcaggctcgacttttgtgaatgggaccaggaaacaaaagcgctctatattggaaaa
gtcggcgttcacgatgaagacagcggcgatccgttcgtaattgattggcgcgcaccggtt
gcctcactgttttattcgtttacaggaagtgaggaagatgttttttatcaatcaccggaa
ggcatagtcgaaggtgaaattttgctgaagcgaaacattgtgattcgaaatcgccgtctg
cagcgggtcgtggatagctatgcgaaagggcaagaaatgagcggcggcgatgaatttttg
ttatataagttaagcgagcaaaaagacaacaaattgaaagacattgtcgcgaccattcaa
gcagaacaaaacgcgatcattcgccatgcaatcaaagaaccgcttattatccaaggagct
gctggaagcgggaaaacgacagtcgccttgcatcgccttgcctatttgttgtatgaattc
cgcgagcagctacgagctgagaaaatggtgatttttgcgccaaacgcgatgtttctcgat
tatatttcacacgtcctgccggagctcggagtaggaacgattgcccaaagtacatttgcc
aactgggggttgtcggtgcttggttcttcttatcagctttatgacacgaaaaaacgcttg
gccaatcaatttgaatcgaaacttgaacagcagtcagaagatgtgcttgcttataaaggc
tcgcttgcatgccaaaagcaaatgcgtcgttttattgatgcttatgtaggggaaagggtg
cccaaaaaagatttttgcccgtgggacggctgcgtgctgaacaaagaaacaatgaaacag
tggattgagcaggattttgccgcttcgccgccaatgaaacggcgggagcgctttcatgcc
cgcgcgaaacgatggattgagatcgaagcaaagcgctttgaagacaaaaaagaacaacag
gcttttaagtcggaagcgcttaaacgtttgcgctcctttctttcctactggtccaagcct
gatcttgctaagttgtacaccgcttttttaaaagaacagcaactgccagtgcctgctagt
ctgaaagagaagcggttaggctacgaagatatagctccacttgtgtacatgcaccaacag
ctttacggaattgagcgcgacgctcgcttcgaccatgttgttatcgatgaagcgcaagat
gtatccccttttatgctagctgttttaaaagagcggacgcgcgcaggaggatttacgata
ttaggggatctagcccaagggattcacggagacgaaggaatttcgaactgggctgccttt
gaagaggtatttgccaacaacgtttcctatgtacaaatggagcggagttaccggtcaacg
atggaaattattgaattttcgaaccggatccttcagcaaatggctttcgctcctgcgcca
gcaaaacctgtttttcgcagcgggcaagacgtggttgtggaacagaggccgacggaacat
gtggcgcactgggtaaaggcgatgcaggataaacaaacacaaaccatcgccgttcttaca
cgtacagaaaaagctagcacagccatttgcaggcagctacaagcagcgggctttgatgcc
catttgcttatagcaggaggagaaaggtatgagggcggcatttctgttttgcctgtttat
ctttcaaaaggatttgaatttgatgctgtcttactaactgatgtaacaaacgaccattac
ccttgtgatgaactccataaaaaactattgtatgtgggttgcacacgggcccttcatgaa
ctgactgtttggtatgacggtgcgttgtccccgatcttggctccttga
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