Shouchella clausii: ABC1588
Help
Entry
ABC1588 CDS
T00228
Name
(GenBank) ATP-dependent exoDNAse alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bcl
Shouchella clausii
Pathway
bcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABC1588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC1588
Enzymes [BR:
bcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABC1588
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABC1588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
SLFN-g3_helicase
AAA_16
UvrD_C
UvrD-helicase
HHH_5
AAA
NPHP3_N
DUF815
AAA_18
TsaE
nSTAND3
FA_desaturase_2
AAA_28
HHH
NTPase_1
T2SSE
DUF4926
AAA_17
AAA_5
MCM_C
Rad17
Motif
Other DBs
NCBI-ProteinID:
BAD64123
UniProt:
Q5WHN2
LinkDB
All DBs
Position
1712378..1714663
Genome browser
AA seq
761 aa
AA seq
DB search
MDNVGEKTLEKGFVKGKVVHVLFRNEENDYTVAMTRIEKTNEQIEGRKITVVGHLPELEV
EETYLFFGQVAEHPRFGLQYKVETFRRDLPQTKSGIIRFLSSDRFPGVGKKTAEAIVDAL
GERAISAIIEDRTVLNNIPKLKEDTATMLYNQLLEQQGAEQVIIQLSQYGFGTELSMSVY
RTYKLQALDVIRTNPYLLIQDVEGVGFRRADQLGAAIGLTGNHPERLRAGLLYLLRECCM
QQGHLYLQEEALITEGTALLSSPNVQIDASELEAILIEMNEEGMLVREEDRIYMKSLYYA
EKGIATNIRRILSQELTQEFTEADIEKTLGHIEDTHAVTYSNTQKEAIATALRSPLLLLT
GGPGTGKTTVIKGIVEAYAALHGLSLEVAAYKNKSFPLKLTAPTGRASKRMAEATELPAS
TIHSLLGWKGSATGFEKGDHEQLEGELLIVDEMSMVDAWVANQLFKAIPKGMQVVLVGDE
NQLPSVGPGQVLKDLLEADVIPTIQLKDIYRQAEGSSIIELAHSMKDGVLPSDFLTKKAD
RVFFPCQPNQVQQAVWQICENAMKKGYSAKEIQVLAPMYRGQAGINELNTMLQSLFNPAK
EGRRELPFGDVVFRKGDMVLQLVNNPEEGVYNGDRGEIVAVFYAKETTEKKDQLVVSFDG
LEVTYEKKDFSQLTHAYCCSIHKAQGSEFPIVVMPVVSSYMRMLRRNLLYTGITRAKQYL
LLCGDRKTMEQAIKHADEHRHSKLKERLQLLLSRTGNVHRG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggataatgttggggaaaaaacgctggagaaaggttttgttaaaggaaaagtcgttcat
gtgttgtttcgcaatgaagaaaacgattatacagtggcgatgacgcggattgaaaagacg
aatgaacaaatagaagggcgcaaaataacggttgtcggccatttgcctgaactggaagta
gaggagacctatttatttttcgggcaagtcgctgaacatccacgctttggcctccaatac
aaagtggaaacgtttaggcgcgatttgccacagacgaaaagcggaattattcggtttttg
tcaagcgaccgtttccctggcgttggcaaaaagacagcggaagcaattgtcgacgctctc
ggtgaaagggccatttcagctattattgaagatcgaacggtattaaacaacatcccgaag
ctaaaagaagatacagcgacgatgctctataaccaacttcttgagcaacaaggcgcggag
caagtcattatccaactgtcccaatacgggtttggcacagagttgtcgatgagtgtttac
cgaacgtacaaattgcaagcacttgatgttatccgcaccaacccgtatttgctcattcag
gatgtagaaggagtcggctttcgccgtgcagaccaattaggggcggcgattggcttaact
gggaaccatccagagcgtttgcgggcggggctgctttatttgctccgggaatgttgtatg
caacaaggacatttatacttgcaggaggaagcgctcattacggaggggactgcattatta
tcgagcccaaacgtacaaattgacgcttccgagcttgaggccatcctcatcgaaatgaat
gaagagggcatgctcgttcgtgaagaagaccgcatctacatgaagtcattgtattatgca
gaaaaaggcattgccaccaacatccgccgaattttaagccaagaactgacacaagaattc
actgaagcagacattgaaaaaacactcgggcacattgaggatacacatgctgttacgtat
tcaaacacgcaaaaagaagcgattgccactgctcttcgttctccgctgttgttgctgaca
ggagggcctggaacaggaaagactacggtcattaaaggaattgtggaagcttatgctgcg
cttcatgggctttctcttgaagtggctgcttacaaaaacaaatctttcccccttaagttg
actgcgcccactggtcgagccagcaaacggatggctgaagcaacggaactgcctgcaagc
acgatacacagcttgctcggctggaaaggcagtgcgaccggctttgaaaaaggcgaccat
gaacagcttgaaggggaactgctaattgtcgatgagatgtcgatggtcgatgcctgggtt
gcaaatcagttatttaaagcgattcccaaaggcatgcaagtcgtgttagtaggggatgaa
aaccagttgccttctgtagggcctggccaagtattaaaagaccttttagaagcagacgtt
attccaacaatccaattaaaggacatttacaggcaagctgaaggctcttccatcattgag
cttgcccactcgatgaaagatggcgtgcttccaagtgattttttaacgaaaaaggcagac
cgcgtcttttttccttgccagccgaaccaagtgcaacaagcagtttggcaaatttgtgaa
aacgccatgaagaaaggctacagtgctaaggagatccaagtactggcacccatgtaccgc
gggcaggcagggatcaatgaattaaacacgatgcttcagtccctatttaatccggcaaaa
gaaggtcgcagagagctgccgtttggggatgttgtttttcgcaaaggcgatatggtcctc
cagttagtcaacaatccagaggaaggcgtatacaacggcgatagaggagaaattgttgct
gttttctacgctaaagagacgacggaaaaaaaagatcagctagtggtttcctttgacgga
ctggaagtcacctatgagaaaaaagacttttcacagctaacccatgcctattgctgttct
atccataaagcacaaggaagcgaatttccgattgtggtgatgccagtcgtgtcgagctac
atgcgcatgctgaggcggaacttgctttatacaggcattacccgggccaagcagtatttg
ctcttatgtggcgatcgaaaaacgatggaacaggcgattaaacatgcagacgagcaccgc
cattccaaattaaaggagcgccttcaactattgctttcacgtactggtaacgttcaccgg
ggatag
DBGET
integrated database retrieval system
