Shouchella clausii: ABC1602
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Entry
ABC1602 CDS
T00228
Name
(GenBank) conserved hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
bcl
Shouchella clausii
Pathway
bcl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ABC1602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC1602
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ABC1602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
BAD64137
UniProt:
Q5WHL8
LinkDB
All DBs
Position
1726717..1727553
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AA seq
278 aa
AA seq
DB search
MHTVWKGSIQFGLVHIPVKLHTATENKDIKMRQLHKKCHTPISYEKRCRHCEEAVEADDI
VKAYEYAKNKFVVIEAEELEQFRKDNEDKAVQILDFVQLEEVDPIYFDRSYFLAPGDGGS
KAYALLQRALADSKKIGIGKIIIRAKEHLAIVRTYGNALMMETIYFPDEVRKLADVPNLP
EAPKVEEKELKTALLLIDQLTSEFDPESYTDEYREQLFDLIEQKKQGNKMVVSEPKEAER
DTNVTDLMSALEASLERTKPKRKKAAASKRKTATKKNA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagtttggaaaggcagcatccagttcgggcttgttcatattcctgttaagctg
cacacggcaaccgaaaacaaagacatcaaaatgcgtcagctccataaaaagtgccatacg
ccaatctcttatgagaaaaggtgtcgccactgcgaggaagcagtagaggcagacgatatt
gtcaaagcatacgaatacgcgaaaaacaaatttgttgttattgaagcagaagaacttgag
cagtttcgaaaagacaacgaagacaaagcggtgcaaattcttgattttgtccaattggag
gaagtcgacccgatttattttgaccgttcttattttttagcgccaggggatggtggctcc
aaagcctacgcattgttgcaaagggcgcttgctgattctaaaaaaattggcattggcaaa
attatcattcgcgcgaaagaacatttggcaattgtccgtacgtacggcaacgccttaatg
atggagacgatttattttcctgatgaggtgcggaagcttgctgatgtccctaatttgcca
gaagcgcctaaagtagaagaaaaagaactaaagacggcgttgcttttaattgaccagctt
accagtgaatttgacccagagtcatacacggatgaataccgggagcagctttttgatcta
attgaacaaaaaaagcaaggaaacaaaatggttgtttcggaaccaaaagaagccgaacgg
gacacgaatgtgaccgatttaatgtcagcgctagaggcgtcattagagcggacaaagccg
aaacggaaaaaagcagctgcatcaaaacgaaaaacagcaacgaagaaaaacgcataa
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