Shouchella clausii: ABC1697
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Entry
ABC1697 CDS
T00228
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bcl
Shouchella clausii
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcl03019
]
ABC1697
03009 Ribosome biogenesis [BR:
bcl03009
]
ABC1697
Enzymes [BR:
bcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABC1697
Messenger RNA biogenesis [BR:
bcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABC1697
Ribosome biogenesis [BR:
bcl03009
]
Prokaryotic type
rRNA helicases
ABC1697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
PhoH
Flavi_DEAD
NuiA
Motif
Other DBs
NCBI-ProteinID:
BAD64232
UniProt:
Q5WHC3
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All DBs
Position
1825306..1826667
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AA seq
453 aa
AA seq
DB search
MNAEHFSRLGLNERLLKGLSAIGVKRPTEIQERLIPAILNRKDVIGQSQTGTGKTFAFLL
PIIEQLDIEQNEVQAVITAPTRELCAQLFDELKKLIVYYDGQVDAQLFVGGTDRKRQAQR
LSTKQPHIVIGTPGRIADLVNTSSLLVYTAKTLVVDEADQMLDMGFLEDVDKVAGRLAED
LQMLVFSATVPEKLQPFLKKYMNNPRHVHVQPEKLAAERVTHQLVPVRHRDKLTVLKETI
RGLNPYLAIIFTNTKEQADEVTAALATEDILVDCLHGGLAPRERKKVMKRVEDLSIQYLV
ATDLAARGIDIKGVTHIINYAFPQDLDFYVHRVGRTARAGADGIALSLYEQSDEAACAKL
ASRGIVFSFVEFKDGEWTELVKPPVGAGRINRKQPTDKGKATVEKQTGNRPIRTGGKAKA
RPKKVKPGYKQKAKAAIAKQKKRERRLNARKEK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgaacattttagccgtttaggtttaaacgagcgactgctcaaaggattgagc
gctattggcgtcaagcggccaactgagattcaggaacgattgattccagcgattttaaat
cgaaaagatgtgattggccagtcgcaaacagggacaggaaaaacatttgcgtttttgctg
ccgatcatcgaacagctcgatatcgagcaaaacgaggtacaggcagtgatcactgcccct
acacgagaactttgcgcccaattatttgatgagttaaaaaagctgattgtctattatgac
gggcaagttgatgcgcagcttttcgttggcggcacggacagaaaacggcaagcacagcgg
ttgtccactaagcaaccgcacattgtcatcggcacgccaggccggattgctgaccttgtc
aatacatcttccttgcttgtatatacggctaagacgcttgttgttgacgaagcggatcag
atgcttgatatgggctttttagaagacgtggacaaggttgccggaaggttagccgaggac
ctgcaaatgcttgtcttttcggcaaccgttcctgaaaagctgcaaccatttttaaaaaaa
tatatgaataacccacggcatgttcatgttcaaccagaaaagctggcggcagagcgtgtt
acccaccagcttgttccagtgcgccaccgggacaagttgactgtgttgaaagagactatt
cgcggcttaaacccgtatttggcgatcatctttaccaatacaaaagagcaagccgacgaa
gtgacagcagctttagctactgaggatatacttgttgattgcctccatggtggcctggca
ccgcgggaacgcaaaaaagtaatgaaacgggttgaggatttatcaatccagtatttggtt
gcaaccgatttggctgcgcgaggcattgacattaaaggcgtgacacacatcatcaattac
gcgtttccacaagacttggatttttatgtccatcgtgtcggtcggacagcgcgggctggc
gcagacggcattgccttgtcgctgtatgagcaaagtgatgaagcggcgtgtgcgaagctt
gccagtcgggggattgttttttcatttgtggaattcaaagatggtgaatggacagagctc
gttaagcctcctgtgggagcgggtcggatcaatcgaaagcaaccaacagacaaagggaaa
gctactgttgaaaagcaaacaggtaatcggcccattcggaccggcggcaaggcaaaagct
aggcctaaaaaagtaaagcctgggtataaacaaaaagcgaaagccgctattgccaaacag
aaaaaacgggagagacgcttaaacgcgcgtaaagagaaataa
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