Shouchella clausii: ABC2019
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Entry
ABC2019 CDS
T00228
Name
(GenBank) ATP-dependent RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
bcl
Shouchella clausii
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
ABC2019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
tRNA_int_end_N2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAD64554
UniProt:
Q5WGF1
LinkDB
All DBs
Position
complement(2133042..2135312)
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AA seq
756 aa
AA seq
DB search
MFKRRLPQLLNQLKKDEHVSYWKEIAPLEAKTVPFPAELDFNICQALRKKGIGELYTHQA
EAFEKALANKHFVAVTPTASGKSLCYNLPVLQEIAASPHSRALYLFPTKALAQDQMSDLH
GMIADIGMDIKCHTYDGDTAPQIRTSIRKAGHIVLTNPDMLHVAILPHHTKWVSFFEHLR
YIVIDELHTYRGVFGSHVANVIARLKRICAYYGANPQFICTSATIANPKELAQELTGSTF
DLIDDNGAPRGKKHFLFYNPPLVNEPLQIRQSAVAKVNELAGMFLKEGIQTIVFAKSRVR
VELILSRLQELTKRTFNRSAIRGYRGGYLPKQRREIERGLRSGEIKGVVSTNALELGVDI
GQLEVCIMTGYPGSIASSWQQAGRAGRRQKESCVIMVAASTPLDQYIIKNPHYFFERPPE
TARLNPHNLVIFIDHLKCAAYELPFSMGDVFGDEVVDDYLDYLTEQHVLHANNGKWHWMS
DAFPAHGISLRSASQENVVIIDQSDVTNHRVIGEMDRFSAMTLLHEEAIYLHEGVQYQVE
QLDWDEKKAFVREVSVEYFTDANLAVSLRVLEEDESREEGDVQLSFGDVSVTGKATIFKK
LRISTLENIGSGPIHLPEEELHTNGMWLSFKSELVETIGESDFEEALVALAHLLHHVAPV
RIMCDRGDIHVVPQRKATHSGLPTIFLYDSYPGGIGLAKEVYERTNVILSDVAVLLDSCE
CESGCPSCVGSASSAKNIKVLVKMLVRQLQKGSMTI
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacggcgtttgccacagctattgaaccaattaaagaaagatgaacatgtatct
tactggaaagaaattgcgccactagaagcgaagacagtgccttttccagctgaattggat
tttaacatttgccaagccttgcgaaaaaaggggattggtgaactgtatacacaccaagca
gaagcctttgaaaaggcattagcaaacaaacattttgttgccgttaccccgacagcgtct
ggaaagtcgctatgctacaatttgcctgtcctacaggagatcgctgcttctccacatagc
cgggcgctgtatttatttccgacaaaggcacttgcacaagaccaaatgagcgatttgcac
ggcatgattgccgatatagggatggatatcaaatgccatacatacgatggcgacactgct
ccgcaaatccgtacgtcgattcgcaaagcaggccatatcgtattaacaaacccggatatg
cttcatgtggcgattttgccccatcatacaaagtgggtatcgttttttgagcacttgcgc
tatattgtcattgatgaacttcatacgtaccgcggcgtttttggcagccatgtcgccaat
gtcattgcccggctcaagcgaatttgtgcatattacggcgctaaccctcaatttatatgc
acttcagcaacgattgcgaatccgaaagagctggctcaagagttaactgggtcaacgttt
gacttaattgatgacaatggggcgccgcgtggaaaaaagcacttcctgttttacaatccg
ccgttagtgaatgagcctttgcaaattcggcaaagcgctgttgccaaagtgaatgagctg
gcaggaatgtttttgaaagaaggaatccaaacgattgtgtttgcgaaaagtagagtgcgt
gttgaactaattttaagcaggctccaagaattgacgaaacggacatttaatcgttcagca
atccgaggctaccgtggcggctatttgccgaaacaacgccgtgaaattgaaagagggctc
cgttccggtgagattaaaggagtcgtatccaccaatgcgttggagcttggcgttgacatt
ggccaactggaagtttgcatcatgactggctatcctggtagcatcgccagctcttggcag
caggcaggccgtgctgggcggagacaaaaagagtcgtgtgtgattatggtggccgcctcc
acgccactcgaccaatatataatcaaaaatccacactatttttttgaacggccgcctgaa
acagcaaggttaaaccctcataatcttgtgatttttatcgaccatttaaaatgtgctgcc
tacgagctgccgttttcaatgggagacgtctttggcgatgaggtcgttgacgactattta
gattacttgacagagcagcatgtacttcatgcaaacaatggcaaatggcattggatgagc
gacgcttttccggcccatgggatcagtttgcgctcagcttcacaagaaaacgtcgtcatc
attgaccaatcagatgtgaccaatcatcgcgttattggcgaaatggaccgctttagcgca
atgacgctcttgcatgaggaagcgatttatttacatgaaggtgttcaatatcaagtggaa
cagttagattgggatgaaaaaaaagcgtttgtccgtgaagtgagcgttgaatattttacg
gacgcgaacctggctgtatctctccgcgttcttgaagaagacgagagtcgggaagagggc
gatgtccagctttcatttggtgatgttagtgtgacaggcaaagcaacgatttttaaaaag
ctacgtattagcacgttggaaaatatcggttcagggccgattcatttgccagaggaagag
ttacacacgaatgggatgtggttatcgtttaaatccgagttggtagagacaatcggcgaa
agcgactttgaagaagcattagtagcattggctcatttgcttcaccacgttgcacctgtg
cgcattatgtgtgaccggggtgatattcatgttgtgccgcaacggaaggcgacccattcc
ggcttgccgacaatatttctatacgattcttacccaggaggaatcgggcttgccaaggaa
gtatatgagcggacaaatgtcattttaagcgatgttgccgttcttcttgattcatgcgag
tgcgaatcaggctgtccgtcttgtgtcggcagcgcctcttcagcaaaaaacataaaagtt
ctcgttaaaatgcttgttcggcaattacaaaaggggagtatgactatataa
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