Shouchella clausii: ABC2047
Help
Entry
ABC2047 CDS
T00228
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bcl
Shouchella clausii
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcl03016
]
ABC2047
Enzymes [BR:
bcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
ABC2047
Transfer RNA biogenesis [BR:
bcl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
ABC2047
Prokaryotic type
ABC2047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
BAD64582
UniProt:
Q5WGC3
LinkDB
All DBs
Position
complement(2164146..2165084)
Genome browser
AA seq
312 aa
AA seq
DB search
MELHFLGTGAGVPAKKRNVSALAIRFLERNGTVWLFDCGEATQHQFLHSPLSLAAVEAIF
ITHLHGDHILGLPGLLSSRSFQGAETPLDIYGPKGLEAFVIQALETTKTKLRFPIRFHVL
AEGRIRDEEKLSVDALALDHPVESYAFRIKEQDKPGTLDAEALKAMGVPPGPLYAQLKKG
ETVKLADGRIVNGSAFLDESIRGRTVVIAGDTAPVKAMEAFASGADVLVHEATFASNKKD
DAHLYGHSTIADACALAKRAAVGQLILTHVSSRYARNENEYRDEAAALLPNVIIAEDLFV
FELEKAGRKKRD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcactttttaggaacaggtgccggtgtgcctgcaaaaaaacgcaatgtcagt
gccttggcgattcggtttttagagcgcaacgggacggtgtggttgtttgattgtggcgaa
gcgacacagcatcagtttctccattctccgttgtctttggcggctgttgaagcgatcttt
attacccatttgcatggcgaccatattttagggttgccaggattgttaagttcccgctct
tttcaaggggcggaaacaccgttagacatttatgggccaaaagggctagaggccttcgtt
atacaagcattggaaacgaccaaaacaaaattgcgtttcccgattcgcttccacgtgctt
gcagaaggacgtatccgtgacgaagaaaaattgagcgttgatgcattggcgcttgatcat
cctgtggaaagttacgcctttagaataaaagaacaagataagcctggaacactcgatgca
gaagcgttaaaagcaatgggcgttccgcctggccccctttatgcgcaactgaaaaaaggg
gaaacagtcaaactcgctgacggccgcatcgttaatggaagcgcgtttttagatgaatcg
attcgtggacggacagtcgtcattgctggagacacggcgcctgtaaaggcgatggaggcg
tttgcctctggtgccgatgttcttgtccatgaagcgacatttgcatcgaacaaaaaagac
gatgcccatctatatgggcactcgacaattgccgatgcatgtgcgttggctaagcgcgca
gccgttggccagctcattttaacccatgtttcctctaggtatgcccgaaatgaaaacgaa
taccgcgacgaagcggcagcgctccttcctaatgtcattattgcggaagatctgttcgtg
tttgaactcgaaaaggcaggccggaaaaaacgtgattaa
DBGET
integrated database retrieval system
