Shouchella clausii: ABC2225
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Entry
ABC2225 CDS
T00228
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bcl
Shouchella clausii
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcl03016
]
ABC2225 (truB)
Enzymes [BR:
bcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABC2225 (truB)
Transfer RNA biogenesis [BR:
bcl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABC2225 (truB)
Prokaryotic type
ABC2225 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAD64760
UniProt:
Q5WFU5
LinkDB
All DBs
Position
complement(2352792..2353700)
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AA seq
302 aa
AA seq
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MEPTGIVVLDKPKGWTSHDCVHQMRKWFQTRKVGHTGTLDPEVDGVLPICIGKATKVVKY
MSDYDKTYIGEVTFGVATTTEDAHGEVVEEKRVNKPFTRTEIEALLQAFIGKIEQTPPYY
SAVKVNGKRLYEYARAGIEVERPTRTVEIKALTLTEITTAKPGCFSFAFSVTCTKGTYIR
TLAVDIGKKAGYPAHMSKLTRTASGPFTQADAIPLSAFAEMSLDERLNKLRPLDTALQHF
PRVTADKELEKRIRNGAVLEKSASFGDGRFLFYNEQGDCLALYQAHPTKAGLIKPETLFC
HV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggagccaacagggattgtggtgctggacaaaccgaaaggatggacatcccacgattgt
gtccaccaaatgcggaaatggtttcaaacacggaaagtcggccatacagggacgctcgat
cccgaagtggatggcgttttgccgatctgcatcggcaaagcgaccaaagtggtcaaatac
atgtccgattacgataaaacgtatataggggaagtcacattcggcgtggcgacgacaacg
gaagacgcacacggtgaagtcgtagaagagaaacgcgtcaataaaccgtttacgcgtacg
gaaattgaagcgttgctgcaagcctttatcggcaaaattgagcagacacccccttattat
tcggctgtaaaagtaaacggcaaacgcttgtatgaatacgctcgagctggcatcgaagtc
gagcggccaacgcgcacagtggaaataaaagcgttgacattgacggaaataacaactgcg
aagccaggttgtttttcgtttgccttttctgtcacatgtacaaaaggtacttacatccgt
acgcttgccgttgatataggcaaaaaagctggctaccctgcccatatgtcaaagctgaca
cggacagcatctggcccgtttacacaagcagatgccattcctttatctgcatttgcggaa
atgagtttggatgagcgcctgaataagttgcgcccccttgatacggctcttcagcatttt
ccacgggtcactgccgataaggaactggaaaaacgaatacgcaatggtgctgtcctggag
aaaagcgcttcttttggagatgggcgttttttgttttataatgaacaaggagattgcttg
gcattgtatcaagcacatccaacaaaggctggacttattaaaccagaaacgttattttgt
catgtttaa
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