Alkalihalobacillus clausii: ABC2233
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Entry
ABC2233 CDS
T00228
Symbol
polC
Name
(GenBank) DNA polymerase III alpha subunit PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bcl
Alkalihalobacillus clausii
Pathway
bcl03030
DNA replication
bcl03430
Mismatch repair
bcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABC2233 (polC)
03430 Mismatch repair
ABC2233 (polC)
03440 Homologous recombination
ABC2233 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcl03032
]
ABC2233 (polC)
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC2233 (polC)
Enzymes [BR:
bcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABC2233 (polC)
DNA replication proteins [BR:
bcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABC2233 (polC)
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABC2233 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
BAD64768
UniProt:
Q5WFT7
LinkDB
All DBs
Position
complement(2359158..2363450)
Genome browser
AA seq
1430 aa
AA seq
DB search
MSQAKETRKERLQLLLDQLQIPDDGRPHFQDGYIEKLAISKEQKIWHFFIRLERLLPAEW
CELFKGRLAQTFRDIANARCSFAYANSETDETVWRSYWPLIANELARVSPPLAATLQKQA
PTVNDNKLSLVAQNEAEAEAIRRKLADPFKDICGQFGLPVLPLAVAVQQSQEAYDEFVRK
RAEEDRSKVVEAMLEKQRVEEEMAKQVKQANLSMGYPIKDEPTPLEAIVDEERRITIQGY
VFATDIRELRSGRTLLTFKMTDYTDSILVKMFSRDKEDVPVMQAVKKGMWLKVRGGIQND
TFVRDLVMIANDFNQVTPIVREDTAEQKRVELHTHSTMSQMDGVVSVGRYIEQAAKWGHP
AIAITDHGVVQAFPEAYGAAKKHDIKVIYGMEANVVDDGVPIAYNSDHRHLLEEEYVVFD
VETTGLSAVYNTIIELAAVKIKNGEIIDTYESFADPKEPLSATIIELTGITDDMVQGAPE
PAEVLKQFREFAGNATLVAHNASFDIGFLNVGYKKLGFSEVTNPVIDTLELGRFLYPELK
NHRLNTLCKKFDIELVSHHRAIYDTQATAYLLWKMVKDAAEKEIVYHDELNNHMGQGNFH
RQRPFHCTLLVTSQTGLKNLYQLVSMSHVDYYFRTPRIPRSQLNKHREGLLIGSACDKGE
VFEGMMQKSADEVEKIAGFYDFLEIQPLGNYGHLIERELVKDKTALQEIVGNIVALGERL
GLPVVATGNVHYLNEEDAIYRKILIASQGGANPLNKQKLPDVHFRTTTEMLEEFSFLGAE
QAEKVVVTASNDIAAQVGDVHPIPDDLYAPKIEGADDEIRNMSYERAKMIYGDPLPEIVE
ARLQKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVATMTEITEVNPLP
PHYVCPSCKHSHFFDDGSVASGYDLPDAECPKCGSMYIKDGQDIPFETFLGFKGDKVPDI
DLNFSGEYQPRAHAYTKELFGEDYVYRAGTIGTVADKTAYGYVKGYQNDHDLLMRGAEID
RLVAGCTGVKRTTGQHPGGIIVVPDYMDIHDFSPIQYPADDKNAEWKTTHFDFHSIHDNL
LKLDILGHDDPTAIRMLQDLSGIDPKTIPTDDPEVMKIFASPDVLGVTEEQILCKTGTLG
IPEFGTRFVRQMLEETKPSTFSELLQISGLSHGTDVWLGNANELIYNGTCELKDVIGCRD
DIMVYLIYKGLESSLAFKIMEFVRKGKGLQPEWVEEMKKHDVPDWYIDSCTKIKYMFPKA
HAAAYVLMAVRIAYFKVHHPILYYATYFTVRADDFELDIMIKGASSIRAKMEEINAKGLD
ASPKEKAVLTVLELSLEMCERGFGFHKVDLYKSSATEFIVDGDKLLPPFNALNGVGTNAA
LNIVKARENGHFLSKEDLQQRARLTKTVVENLSEHGCLEGLPESNQLSLF
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgaaagagacgagaaaagagcgccttcaactattgcttgaccagctgcaa
attccagatgacggccgtcctcattttcaagacggctatattgaaaaactagcaatctca
aaagaacagaaaatctggcattttttcattcgattagaacgattgctgccagccgaatgg
tgcgaactgtttaaagggcgtcttgcccagacgtttcgagacattgccaatgcacgttgc
tcatttgcatatgccaacagcgagacggatgaaacagtatggcgcagctattggcctctt
atcgccaacgagttggcgcgtgtctctccacctcttgctgctacgttgcaaaagcaagcc
ccgacagtcaatgacaataagctgtctttagtagcgcaaaacgaagcggaagcagaagcg
ataaggcgaaagcttgccgacccgtttaaagacatatgcggccagtttggcttacctgta
ttgccccttgcagtcgccgtacaacaatcacaggaagcctatgatgagtttgttcgcaaa
cgtgctgaagaagaccggtcaaaagtggtcgaagcgatgttggaaaaacaacgggttgaa
gaggaaatggcgaagcaagtaaagcaagcgaacttgtctatgggttatcccattaaagac
gagccgacgccgctggaagcgattgtcgatgaagaacggcgcattaccattcaaggctat
gtgttcgccacagatattcgtgagctccgcagtgggcgcacattgctaacctttaaaatg
acagattacaccgattcgattttagtgaaaatgttttcccgggataaagaagatgtgcca
gtcatgcaagcggtcaaaaaaggcatgtggttaaaggtgcgaggcggcatccagaacgat
acatttgtccgcgacctcgttatgattgccaatgattttaaccaagtaacgccaattgtc
cgcgaagatactgctgaacaaaaacgagttgaacttcatacccattcgacaatgagccaa
atggatggcgtcgtttctgttggcaggtatatcgagcaggctgcaaaatggggccatcca
gcgattgccattacggatcacggcgttgtccaagcgtttccagaagcatatggcgctgcc
aaaaagcatgacattaaagtgatttatggcatggaggcaaacgtcgttgatgacggcgta
ccaattgcttacaactcagaccaccgtcacttgctcgaagaagagtatgtcgtctttgac
gtggaaacgacgggtctgtcggctgtctacaatacgatcattgagcttgctgccgtcaaa
attaaaaacggcgaaatcatcgatacatatgaatcgtttgcagatccaaaagagcctctg
tccgcaacgatcatcgaattgacagggattaccgatgacatggtccaaggcgctcctgaa
cctgctgaggtgctgaagcaatttcgtgaatttgccggcaatgccacgttggttgcccat
aatgcgagctttgatattggctttttgaatgtcggttataaaaaactaggcttttcggaa
gtcacaaacccagtcattgacacgttggagcttggccgttttctgtacccagaattaaaa
aaccaccgtcttaatacgttatgtaagaaatttgacattgagctcgtcagccatcaccgc
gcgatttatgatacacaggcaacagcatatttgctttggaaaatggtcaaagatgcggcg
gagaaagaaattgtttaccatgatgaattaaataaccatatggggcaagggaatttccac
cgtcaacggccgttccactgcacgctgcttgtcacatcgcaaacagggttgaaaaattta
taccagctcgtgtccatgtcccatgttgattactatttccggacgccacggatccctcgt
tcccagttaaataaacatcgggaagggttgctaatcggttctgcttgcgataaaggagaa
gtctttgaaggcatgatgcaaaaatctgccgatgaggtggagaaaatcgctggtttctac
gactttttagaaattcaaccactcggcaattacggacacttgattgaacgggaactcgta
aaagataaaacggcattgcaagaaattgtcggcaatattgtcgctcttggcgagcggcta
gggctgccggttgtggccacagggaatgttcattatttaaacgaggaagatgcgatttac
cgcaaaattttaattgcttcccaagggggagccaatcctcttaataagcagaagttgccg
gacgtccatttccggacaacaacggaaatgcttgaagaattttcctttctcggggcagaa
caggcagagaaagtggttgtcactgcttctaatgacattgccgcacaagtgggtgatgtc
catccgattccagatgacttatatgcccctaaaattgagggcgctgacgatgaaatccgg
aatatgagctatgaacgggccaagatgatttacggcgatccattgccggaaattgtagaa
gcccgtttgcaaaaagagttaaaaagcattattggccatggttttgctgttatttattta
atttcccataaactagttaaaaaatcgcttgatgatggctatctcgttggctcccggggg
tccgtcggttcttcgtttgtggcaacgatgacggaaattaccgaagtgaatccgctgccg
cctcattatgtatgcccgtcatgcaagcattcccatttctttgatgacggttctgttgcg
tctggctatgacttgcctgatgctgaatgcccgaaatgcggcagtatgtatattaaagat
ggacaggatatcccgtttgaaacgtttcttgggtttaaaggcgacaaagtgcctgatatc
gacttgaacttttcaggtgaataccagccccgtgctcacgcttatacaaaggaattgttt
ggcgaagactacgtgtaccgtgccgggacaattggcacagtagcggataaaacagcatac
ggctatgtaaaaggctaccaaaacgaccatgatttgctcatgcgtggggcagaaatcgac
cgccttgtcgccggctgcacaggcgttaaacggacaacgggccagcatccaggaggaatc
atcgttgttccagactatatggacattcatgatttttcgccgatccaatacccggccgat
gacaaaaatgcagagtggaaaacgacgcattttgacttccattcgattcatgataatttg
cttaagctcgatattcttggacacgatgatccgacggcgattcgcatgcttcaagattta
agcggaatcgatccaaaaacgattccgacggatgaccctgaggtgatgaaaatctttgct
tcaccagatgtcctcggtgtgacagaagaacaaatactgtgcaaaaccggtacgctcggc
attcctgagtttggcacccgctttgttaggcaaatgcttgaggaaacgaaaccgagcacc
ttttctgagctgttgcaaatttccgggctctcccacgggactgacgtttggcttggcaat
gccaatgagctcatttacaatggcacgtgcgaattgaaagatgtcattggctgccgtgat
gacattatggtttacttaatttacaaagggctcgaatcgtcactcgcttttaagattatg
gagtttgtccgaaaaggcaaaggcttgcagcctgaatgggtcgaagaaatgaaaaagcat
gatgtgcctgattggtatattgattcatgcacaaaaatcaaatatatgttcccgaaagca
catgccgctgcctatgtgttgatggctgtgcggatagcttattttaaagtccatcatccg
attttgtattatgcaacctattttactgttcgtgctgatgactttgaactggacattatg
atcaaaggcgcaagttcgattcgtgccaaaatggaagaaatcaacgcgaaagggcttgac
gcgtccccgaaagagaaagctgttttgacggtgcttgagctctcactagaaatgtgcgaa
cgtggcttcggttttcataaagttgatttatataaatcatcagcaacagagtttatagtt
gatggcgataagctgttgccaccttttaacgcactaaacggcgtcggcacaaacgcggct
ctaaacatcgtcaaggctcgggaaaatggccactttttgtcaaaggaagacttgcagcag
cgggccagattgacaaaaacggttgtcgagaacttgtctgaacatggctgtttagaaggc
ttgcctgagtctaaccagctatcgttgttttaa
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