Shouchella clausii: ABC2244
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Entry
ABC2244 CDS
T00228
Symbol
sigD
Name
(GenBank) DNA-directed RNA polymerase sigma-28 factor sigma-D
KO
K02405
RNA polymerase sigma factor FliA
Organism
bcl
Shouchella clausii
Pathway
bcl02020
Two-component system
bcl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABC2244 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABC2244 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcl03021
]
ABC2244 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bcl02035
]
ABC2244 (sigD)
Transcription machinery [BR:
bcl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABC2244 (sigD)
Bacterial motility proteins [BR:
bcl02035
]
Flagellar system
Flagellar assembly proteins
Stator
ABC2244 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DUF6889
HTH_16
HTH_38
NNH1
PCI
Motif
Other DBs
NCBI-ProteinID:
BAD64779
UniProt:
Q5WFS6
LinkDB
All DBs
Position
complement(2373577..2374341)
Genome browser
AA seq
254 aa
AA seq
DB search
MANAAELWKQWDDEHSEVAAEALIEHYMPLVAYHVQRISNGLPSSISKDELKSHALSGLL
DAIAKFDSKRALKFDTYASFRIRGAIIDGLRKEDRLPRTIRDKVKKLEQITEQLEQEKGR
SVLPGEVAAAMGLPEKEIEALKREQFASHTLSLDDVMHMNDHLDPSAVAYQFEDEQAIMP
DDKLVEEDTRKELAEMIKELGRNEQLVIQLSYYEELSLTEIGRILNLSTSRISQIHARAI
AKLRKGLQKKEFVR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgctgcagagttatggaaacaatgggatgacgaacattcagaagtagctgct
gaagcgttgatcgaacactatatgccgctagttgcttaccacgtgcaacggatttcgaat
ggcttgccgtcatcgatttcaaaagatgaactgaaaagccacgcgttaagcggcctgcta
gatgcaattgccaagtttgattccaagcgagcgctaaaatttgatacatatgcatcgttt
cgaatccggggagcgattatcgacgggctccgcaaagaagaccgcctgccacggaccatc
cgtgataaagtaaaaaagttggaacaaatcacggaacaactagaacaggagaaaggtcgg
tctgttcttcctggcgaagttgccgctgcaatgggtttgccagaaaaagagatcgaagca
ttaaaacgggaacaatttgccagccatacgctttccttggacgacgtcatgcatatgaac
gaccacttggaccctagcgctgttgcttaccaatttgaagatgaacaagcgattatgcct
gatgataaattagtcgaagaagatacacggaaagaattagcagagatgataaaagagcta
ggacgcaatgaacagcttgtcatccaacttagctattacgaagagttgtcattgacggaa
atcgggcgcattttaaatttgtcgacttcacgcatctcgcaaatccatgcccgggcaatt
gccaaactgcggaaaggcttgcaaaagaaagaatttgtccgttaa
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integrated database retrieval system
