Shouchella clausii: ABC2417
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Entry
ABC2417 CDS
T00228
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bcl
Shouchella clausii
Pathway
bcl00010
Glycolysis / Gluconeogenesis
bcl00020
Citrate cycle (TCA cycle)
bcl00260
Glycine, serine and threonine metabolism
bcl00280
Valine, leucine and isoleucine degradation
bcl00310
Lysine degradation
bcl00380
Tryptophan metabolism
bcl00620
Pyruvate metabolism
bcl00630
Glyoxylate and dicarboxylate metabolism
bcl00640
Propanoate metabolism
bcl00670
One carbon pool by folate
bcl00785
Lipoic acid metabolism
bcl01100
Metabolic pathways
bcl01110
Biosynthesis of secondary metabolites
bcl01120
Microbial metabolism in diverse environments
bcl01200
Carbon metabolism
bcl01210
2-Oxocarboxylic acid metabolism
bcl01240
Biosynthesis of cofactors
Module
bcl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bcl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bcl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bcl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
ABC2417 (pdhD)
00020 Citrate cycle (TCA cycle)
ABC2417 (pdhD)
00620 Pyruvate metabolism
ABC2417 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
ABC2417 (pdhD)
00640 Propanoate metabolism
ABC2417 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ABC2417 (pdhD)
00280 Valine, leucine and isoleucine degradation
ABC2417 (pdhD)
00310 Lysine degradation
ABC2417 (pdhD)
00380 Tryptophan metabolism
ABC2417 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
ABC2417 (pdhD)
00670 One carbon pool by folate
ABC2417 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bcl04147
]
ABC2417 (pdhD)
Enzymes [BR:
bcl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
ABC2417 (pdhD)
Exosome [BR:
bcl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
ABC2417 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
FAD_oxidored
GIDA
FAD_binding_2
NAD_binding_8
UDPG_MGDP_dh_N
AlaDh_PNT_C
DAO
FAD_binding_3
Glyco_hydro_3_C
3HCDH_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
BAD64952
UniProt:
Q5WFA8
LinkDB
All DBs
Position
complement(2545568..2546974)
Genome browser
AA seq
468 aa
AA seq
DB search
MVVGDFAQEVDTLVVGSGPGGYVAAIRAAQLGQKVTIVEKGSLGGVCLNVGCIPSKALIQ
AGHRAHLAKSSEDIGIRAENVAIDFEKVQEWKGSVVKKLTGGVEGLLKGNKVEIIRGEAY
FSGEDTVKIMDEKSSSTYKFKHCIIATGSSPIEIPNFKYTDRVINSTGALALKEVPKKLV
VIGGGYIGIELTGAYSNLGSEVVVLEGTKQILPGFEKQMAKLVERKLKKNGVTFHTEAMA
KGVEETDNGVKVTAEIKGEEKVIEADYVLVTVGRKPNTEEIGLEGIGVEMDDRGYIKVDK
QGRTSVKNIFAIGDIVPGPALAHKASYEAKVAAEAISGEPSEVDYLAIPAVCFSEPELAT
VGYNEAQAKEAGYDVKVAKFPFAANGRALSLNDADGFMKLVTRKEDGLVIGGQIAGPNAS
DMIAEIGLAIEAGMTAEDIALTIHAHPTLGEITMEAAEVALGTPIHTL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggttgttggagatttcgcacaagaagtagatacactcgtagttggctccggcccagga
ggttacgttgcggcgatccgtgctgcgcaacttgggcaaaaagtaaccattgtcgagaaa
ggcagccttggcggcgtttgcttaaacgtcggctgtatcccatcaaaagcgttaattcaa
gctgggcaccgcgctcatcttgccaagtcttctgaagacatcggcattcgcgctgaaaac
gttgctattgattttgagaaagtccaagaatggaaaggctctgttgtgaaaaagctaacg
ggcggcgtcgaaggcttgctcaaaggcaacaaagtcgaaatcatccgtggcgaagcctat
ttctccggtgaagacactgtgaaaattatggatgagaaaagctcaagcacgtacaagttc
aaacattgcattatcgcgactggctcaagcccaattgaaattccaaacttcaaatacaca
gatcgcgttattaattccacaggcgctcttgctttaaaagaagtgccgaaaaaattggtt
gtcattggcggcggctatatcggaattgagctaacaggtgcctattcaaaccttggatca
gaagttgtcgttcttgaaggcacaaaacaaattttgcctggtttcgaaaaacaaatggca
aaacttgttgagcgcaagctgaagaaaaatggcgttacgttccatacagaagcaatggcc
aaaggcgtggaagaaacggataacggcgtaaaagtaacagccgaaatcaaaggcgaagaa
aaagtgatcgaagctgattacgtccttgtgacagttggccgtaaaccgaacactgaggaa
atcggccttgaaggcatcggggtagaaatggatgaccgtggctacattaaagtagacaag
caaggccgcacgagcgtgaaaaacattttcgcgatcggcgatattgttccaggtccagct
cttgcccataaagcttcttatgaggctaaagtagcagcagaagcgatcagcggcgaacct
tcagaagttgattatctcgccattcctgccgtttgcttctctgagccagaattggcaaca
gttggctacaacgaagcacaagcaaaagaagctggttatgacgttaaagtggcgaaattc
ccattcgctgcaaatggccgcgctttgtctttaaacgatgctgacggctttatgaagctc
gttacgcgtaaagaagacggccttgttattggcggacaaatcgctgggccaaatgcatca
gatatgatcgctgaaatcggtttagcaattgaagcaggcatgacagctgaagacattgca
ttaaccatccatgcgcatcctacgcttggcgaaattacgatggaagcggctgaagttgcc
ctaggcacgccaatccacacattgtaa
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