Shouchella clausii: ABC2490
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Entry
ABC2490 CDS
T00228
Symbol
helD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcl
Shouchella clausii
Pathway
bcl03420
Nucleotide excision repair
bcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABC2490 (helD)
03430 Mismatch repair
ABC2490 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC2490 (helD)
Enzymes [BR:
bcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABC2490 (helD)
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABC2490 (helD)
MMR (mismatch excision repair)
Other MMR factors
ABC2490 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
UvrD_C
PhoH
AAA_30
SLFN-g3_helicase
ResIII
nSTAND3
DEAD
AAA_16
NPHP3_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
BAD65025
UniProt:
Q5WF35
LinkDB
All DBs
Position
complement(2611912..2614212)
Genome browser
AA seq
766 aa
AA seq
DB search
MQYEKERAAYIHAFIRTKQAMLREQLEGVAGDEMELKETFWDHVTVNFSNSHEIQETISS
IKQQAELLHERERSGALIKKQMRTLRRLADSPYFGRIDLKIEGEDQAEPIYIGLASLMDE
NDSDFLIYDWRAPISSVYYDSEIGPVTYTAPAGTVKGVLENKRQYVFRRGELKAMFDTSL
AIGDERLKESLSEGASRYMKTIVSTIQKEQNQAIRDEKSRYLVIQGVAGSGKTSVAMQRA
AYLLFRHRSHIEANQLVLFSPNELFSSYVSTVLPELGEENMKQLTFRGYLYKRLGRVYEV
EDGFAQLEYILGAAKGELYRTRMRSIAVKSGRAFKEKLDAFIEKLKEGGLFFKDIRFRKK
TLIPKEDIETYFYCLDHGIPLQNRLRLTGEWLLKEIAKQEGKERSEAWVEKARELLDNET
LLRTHWEVEKATANEEGFGTQERQEQLIAKQLVREAFEPLKKRIKALAFIDSEKLYEQFL
FDDCHRDTEGFAAVALWSSSEISKKRMPYEDATPFLYLQDRIKGLQVDRSIKHVFIDEAQ
DYTHFQLVYMQMLYPAAHFTIVGDVSQTLYFHGPNQTGLIGGDEADVKYMAFYKSYRSTE
AIIRFAREMLPNPEEIIPFERPGDVPVLVKGTSRQALIKPVKEWVEQMGERGYRTVAVIV
KTAKEANDVHAQLSEWLDIQLVAKDHHEYKEGAVVLPVYLAKGIEFDAVGVFDASASHYA
SSQERYHLYTACTRAMDHLTVFAAGEWSPWLKPIPSHLYEEKQALS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatacgaaaaagaacgcgccgcttatatacatgcatttatcaggacaaaacaagcg
atgctccgtgaacaattggaaggcgtagcgggcgatgaaatggaattgaaggaaacgttt
tgggatcatgtcaccgtcaacttttccaatagccacgagattcaagaaacgatttccagc
attaaacaacaagccgaacttttacatgaacgggaacgtagtggcgcactaattaaaaaa
caaatgcggacgttgcgacggttagctgattctccctactttggccgaatagatttaaag
atcgaaggcgaagatcaggcggaaccgatttacattggcctcgcctcgctaatggatgaa
aacgatagcgattttctcatttatgactggcgtgccccgatttctagcgtctattatgac
tcagaaattggccctgttacctatacggcgccagcgggtacggtcaaaggggtgttagag
aacaagcggcaatatgtgtttcgccgtggcgagttaaaagccatgtttgatacatcgctt
gcgattggtgacgaacgtttaaaggaatctcttagcgaaggcgcttcccgttatatgaaa
acgattgtttccacgattcaaaaagaacaaaaccaagccatacgtgatgaaaaaagccgg
tatttggttatacaaggagtagcaggcagcggaaaaacgtctgtggcgatgcagcgtgct
gcttatttgctttttcgccatcgttctcacatcgaagcaaaccaacttgttttgttttcg
ccgaatgagttgttttccagttatgtgtcgactgttcttcctgagttaggcgaagaaaat
atgaagcaattgacgtttcgtggttacctttataagcgacttgggcgtgtgtatgaagta
gaagacggatttgcccagcttgaatatatactaggcgcagctaaaggcgagttgtaccga
acgcgaatgagaagcattgctgtaaaatcaggacgtgcatttaaagaaaaactggatgct
tttattgaaaagctgaaagaagggggactattctttaaagacatccgttttcgcaaaaag
acactgataccaaaagaagatattgaaacgtatttttattgcttggaccacggcattcct
ttgcaaaatcggcttaggctcactggggaatggttgctaaaagagatcgccaaacaagaa
gggaaagaacgttctgaagcatgggtcgaaaaagcccgtgagctgttagacaatgaaaca
ctgctgcgaacgcactgggaagtagaaaaggcaactgcaaacgaagaggggttcggtacc
caggaaagacaagaacaactcattgctaaacaactggtgcgcgaggcgtttgagccattg
aaaaagcggataaaagcgctggcttttatcgatagtgaaaagctatacgaacaatttttg
tttgatgattgccatcgggatacggaggggtttgctgctgttgccttatggtctagcagt
gaaattagtaaaaagcggatgccttatgaagatgcaacgccttttctctatttacaggac
cgtattaaagggttacaagtagaccggtccattaaacacgtcttcattgatgaagcacag
gattacactcattttcagctcgtctatatgcaaatgctctatccagccgcccattttaca
attgtcggcgacgtcagccagacgctttatttccacggaccaaaccaaacaggcttaatc
ggtggcgacgaggctgatgtcaaatacatggcgttctataaaagctatcgttctactgaa
gccattattcgttttgctcgggagatgctgccgaatccagaggagattatcccgtttgaa
cggccaggtgatgtgcctgttttagtgaagggaacaagccgccaagctttaataaagcct
gttaaagaatgggtcgaacaaatgggagagagaggctacaggacggttgccgtaatcgtc
aaaacggcgaaagaagcaaacgatgtccatgcccaactgagcgaatggctcgacattcag
cttgtggccaaagaccatcatgaatacaaagaaggagcagtcgttttgcctgtttacttg
gcgaaaggaattgaatttgatgcagttggcgtatttgatgcgtctgcaagccattatgct
tcttcccaagaacggtaccacctttacacagcatgcacgcgggcgatggaccatttaact
gtttttgccgcgggcgaatggtcaccatggctgaagccgatcccgtcccatctttatgaa
gaaaaacaagcgctctcctaa
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integrated database retrieval system
