Alkalihalobacillus clausii: ABC2709
Help
Entry
ABC2709 CDS
T00228
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bcl
Alkalihalobacillus clausii
Pathway
bcl03030
DNA replication
bcl03410
Base excision repair
bcl03420
Nucleotide excision repair
bcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABC2709 (polA)
03410 Base excision repair
ABC2709 (polA)
03420 Nucleotide excision repair
ABC2709 (polA)
03440 Homologous recombination
ABC2709 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcl03032
]
ABC2709 (polA)
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC2709 (polA)
Enzymes [BR:
bcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABC2709 (polA)
DNA replication proteins [BR:
bcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABC2709 (polA)
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABC2709 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABC2709 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
ComZ
Motif
Other DBs
NCBI-ProteinID:
BAD65244
UniProt:
Q5WEG6
LinkDB
All DBs
Position
complement(2840762..2843395)
Genome browser
AA seq
877 aa
AA seq
DB search
MKKLVLIDGNSIAYRAFFALPLLNNEKGEYTNAVYGFTTMLLKVLEDEKPSHMLVAFDAG
KSTFRHQTYAAYKGTRQKTPSELSGQIPMIHQVLDAFSIKRYEVDEYEADDIIGTAATNA
AKEGFDVVVITGDKDLLQLVDDRVEVVLTKKGISEVDRYNREKVAERYGLEPKQIIDLKG
LMGDSSDNIPGVPGVGEKTALKLLAEFRDVETVLDSIDAISGKKLKERLQENKDQALLSK
KLATIALDVPLAETLDSFEYGGYEYKQVKEAFKELSFHSLLGRIDGNGDEESAPQQLTEL
DFDIVEEPLPEHFSSPSALVVEVLAENYHQAEIAGMAVANEKGCFYFPTEKAVKSDAFRA
FARSQEKKKWLFDAKRAVVALAWHGVDLNGVDFDLQMASYLLDPSLSSHEISDIATRKGT
GGVAEDEAVYGKGAKRSLPEEAALAEHLCRKANAMFTLKSTLEDELAQNEQLELLKKLEM
PLSVVLGRMEKEGVRVDREQLEEMGKDLSDRLNTLEKAIHKEAGEPFNINSPKQLGVILF
EKLGLPPVKKTKTGYSTSADVLEKLAGTHPIIEHLLLYRQLGKLYSTYIEGLLKVIDSET
GKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRKAFVASKEGWKIVAADYSQIEL
RVLAHISGDERMKEAFLTGMDIHTKTAMDVFHVKREEVTDLMRRSAKAVNFGIVYGISDY
GLSQSLGITRKEAKDFIDRYLASYPQVKAYMENVVKEAKEKGYVQTLLARRRYLPELKSR
NFNQRSFAERTAMNTPIQGTAADIIKRAMVKMSEALEETGLKANMLLQVHDELIFEVAPD
DVEPLQELVTEVMEQALELDVPLQVDVSSGNSWFDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaattagtgcttattgacggcaacagcattgcttaccgtgcattttttgcattg
ccgcttttaaataatgaaaaaggcgaatatacaaatgctgtctacggctttacgaccatg
ttgttgaaggttctcgaagacgaaaaaccgagccatatgcttgtcgcctttgatgcaggg
aaatcgacgttccgccatcagacttatgcggcttataaaggcacgaggcagaaaacgcca
tcagagctatctgggcaaattccaatgattcaccaagtgctcgatgcgttttcgattaag
cgttatgaagtagacgaatacgaagcagacgacattatcggcacggcggcaacgaatgca
gcaaaagaaggctttgacgttgttgtcattacaggtgataaagatttgcttcaattggtt
gatgaccgtgttgaagtcgtgctgacgaaaaaaggcatttctgaagtggatcgctataat
cgtgaaaaagtggctgaacgctacgggcttgaaccgaaacaaattattgatttaaaaggg
ttaatgggcgattcgtctgataacattccaggtgttcccggcgtaggtgagaaaacggca
ctaaaattgcttgccgaattccgcgacgtagaaacggtgcttgattcgattgatgcgatc
tctgggaagaagctgaaagaacgtcttcaagagaataaagaccaagccctcctaagcaaa
aaactcgccacaattgcccttgacgtgccacttgccgaaacgcttgattcgttcgagtat
ggcggatatgagtataaacaagttaaagaagcgtttaaagagctgtcttttcattcgttg
cttggccgcattgacggcaacggcgatgaagaaagtgcaccacagcaattgacggaactg
gattttgatatcgttgaagaaccgttgcctgaacatttttccagcccgtcagctttagtc
gtcgaagtgttagcggaaaactaccatcaagccgaaattgccggtatggcggtggcgaac
gagaagggctgcttttatttcccgactgagaaagcagtgaagtcagacgcgtttagggca
tttgcccgttcgcaagaaaaaaagaaatggctgtttgacgcaaagcgcgctgtcgtcgct
ttagcctggcatggggttgacttaaacggcgttgattttgacttgcaaatggcttcctat
ttgctcgatccatcgctgtcatcccacgaaattagcgacattgctacccgtaaagggaca
ggtggcgtggctgaagatgaagctgtatacggcaaaggcgccaagcgctctcttccagaa
gaggccgccctagccgaacatctttgccgtaaagcgaatgccatgtttacgttaaaaagc
acattggaagatgaactggcgcaaaatgagcagcttgaattgctcaagaagttagaaatg
ccattgtctgttgtacttggccgtatggaaaaagaaggtgtccgtgtcgaccgagaacaa
cttgaggaaatgggcaaagatttatcggatcgcttgaacactctagaaaaggcgattcat
aaagaagctggagaaccattcaatattaattcaccgaaacagcttggcgttatcctgttt
gaaaaactagggttgccgcctgtgaaaaaaacaaaaacaggctattccactagtgctgat
gtattggaaaaacttgcaggcacacatccaattattgaacaccttcttctttaccggcaa
cttggcaagctctattcaacatacatcgaagggttgcttaaagtgatcgattcggaaaca
gggaaagtccatacccgttttaaccaagctttaacgcaaacaggacgcctttcgtcgaca
gacccgaatttgcaaaacatccctatccgtttagaggaagggagaaaaatccgcaaagca
ttcgttgcctcgaaggaaggctggaaaatagttgcggctgattactcgcaaattgagctc
cgtgtcctcgcccatatttctggcgatgaacggatgaaggaagcgtttttaacggggatg
gacatccatacaaaaacggcaatggatgttttccatgtaaaacgtgaggaagttactgat
ttgatgagaaggagcgcgaaggccgtcaattttgggattgtctacggcataagcgattat
gggctctcacaaagcctaggaattacgagaaaagaagcgaaagactttatcgaccgctat
ttagcaagttatccacaagtgaaagcttatatggagaatgtggtgaaagaagcaaaggag
aaggggtatgtccaaacactgcttgcgagaaggcgttatttgcctgaactgaaaagccgc
aatttcaatcagcgcagttttgcagaacggacagcgatgaacacacccatccaagggacc
gcagctgacattattaaacgggcgatggtgaaaatgagtgaagcgttagaagaaacaggg
cttaaagcaaacatgttgctccaagtccatgacgaactcatttttgaagtggcgcctgac
gatgtggaaccgttacaagagcttgtcacagaagtaatggaacaggcacttgagcttgat
gtgcctttacaagtggatgtctctagcggaaattcatggtttgacgcgaaataa
DBGET
integrated database retrieval system
