Shouchella clausii: ABC2724
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Entry
ABC2724 CDS
T00228
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bcl
Shouchella clausii
Pathway
bcl03030
DNA replication
bcl03430
Mismatch repair
bcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABC2724 (dnaE)
03430 Mismatch repair
ABC2724 (dnaE)
03440 Homologous recombination
ABC2724 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcl03032
]
ABC2724 (dnaE)
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC2724 (dnaE)
Enzymes [BR:
bcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABC2724 (dnaE)
DNA replication proteins [BR:
bcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABC2724 (dnaE)
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABC2724 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAD65259
UniProt:
Q5WEF1
LinkDB
All DBs
Position
complement(2858631..2861918)
Genome browser
AA seq
1095 aa
AA seq
DB search
MDALITNVYSEYSLLQSTNRVDELVQAAKEAGYTALSLTDRHVLYGAVPFFQSCRKAGLK
PLLGLEVTVRLDEEIIPVRMVAKNEEGYRQLVAHSTSLGFQTKQAAIELETWKANSTACF
VFIPKEAFVAAKGNWLHFWERLAGGLEAFIELAGGESDHELIQFANAHQIPCVAAPPTRF
LRKEDAPVYQLVRAIGAGTTTTHLELEEGWQRWHLPTANSLKERFPEKALLQARALAEKV
EPYLPEEKPRIPAYDGLTVEQADKRLETLCQQGLKARYKAVSVEAERRLEHELAIIAERG
YSSYFLIVADFVGYAKKSGILTGPGRGSSASSIVAYTLFITDVDPLAHDLLFERFLNPER
ASLPDIDVDFPDYRRDEVIAYVRERFGHDRVAQVLTFGTFAARAAIRDVGKALSIRHTFV
DRVAKSLIPASLSLNEAQEKGVFKGLESPELDELLFFAKQIEGLPRHASTHAAGVIISDK
PLNNKTALQLGIDGHAVTQADMDSLARLGLVKFDFLGLRNLTLLERMLKVIEQEEGVALN
LQHIPLNDKATFQLLQQGKSTGIFQLESAGMRQVLKQLQPSQFEDIVATSALYRPGPMAF
IPEYIRGKHGHTQAIVPHESLRPIVEPTFGVLVYQEQIMQVVQATANYSLAEADLFRRAI
SKKQHDVIIQERHQFIHRAVENGFLPEEAEAIFSLIERFANYGFPKSHATAYSFISYWLA
YLRVHFPAAFFAALFSSVWQNHEKLYSYINEAKKEGIRVLPPSVCKSGLLFELENGQIRF
GLLPISGVNVQAVNEIISKRRKNSDSNLFMFYAHVASTAVNKRVMEALIKAGALDEFGQS
RATLLGNLDKAEAFVEQVRSFKASSGGLFTIKPAVPAYLDVTPSTKMEDLEGEREVLGFY
LSGHPIENELERLAPFGRIPLAECIPSRKPVRIAGMVIDVKKIVTKKGEAMAFLTLSDES
GECSCVAFPQAWKVYEGLFAPHALVFLEGVLEERQGKTQFIIHKAADVLQLNKNKKKQTL
YIRLTADKDQPTRLSDLKYVLSQDVGSTQVILYREKEQARTRLADEYSVAPTRKTLQLLK
QMFGEENIVLKSDEE
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
gtggatgccctgattacgaatgtttacagcgaatacagcttactccagtcaacgaaccgg
gtggatgagcttgtacaagctgctaaggaagctggctacacagcgctttcccttacagat
agacatgtattatatggggctgtgcctttttttcaaagctgtcgtaaagctggactcaaa
ccgttgcttggcctcgaagtgactgtccgacttgatgaagagataataccggtacggatg
gtcgccaaaaatgaagaaggttatcgccaacttgttgcccatagtacatcgcttggcttt
caaactaaacaggcagcgattgagctagaaacatggaaagcaaacagcaccgcgtgtttt
gtttttatcccgaaagaagcctttgttgcggcaaaaggcaattggctgcacttttgggag
cgcctagctggcgggcttgaggcgtttatcgagcttgcaggcggcgaaagcgaccacgag
ctcatacagtttgcgaatgcccaccaaatcccgtgtgtggctgctccgccaacccggttt
ttgcgcaaagaggatgcgcctgtttaccaacttgtgcgtgcgataggggctgggacgacg
acgactcaccttgaattagaagagggctggcaacggtggcatttgccgaccgcaaactcg
ctgaaagaacgttttcccgaaaaagcgcttctgcaggcaagggcgcttgcggaaaaagtt
gaaccgtatttgcctgaagaaaagccgcggatacctgcttacgatgggcttacggtcgaa
caagcagataaacgcttagaaacgttatgccagcaaggtttgaaagcacgatacaaggca
gtgtcagtagaggctgaaaggcggttggaacatgagttagcgattattgcagaacggggt
tattcctcgtattttttaattgtcgctgactttgtcggctatgccaaaaaatcaggcatt
ttaacaggaccaggcaggggctcgtcggctagttccatcgtcgcttatacgttgttcatt
accgacgttgacccgctagcccatgatcttttatttgaacgctttttaaaccctgagcgt
gcaagtttgcccgatatcgatgtcgattttccagactatcgccgtgatgaagtgattgct
tatgttagagagcggtttggccatgatcgagttgcccaagtgttaacgtttggcacattt
gcagcacgcgctgcgattcgcgacgttggaaaggcgctgtcgatccgccatacttttgtc
gatcgcgttgcgaagtcgttaatccctgcttctctcagccttaatgaagcgcaggaaaaa
ggcgtctttaaaggccttgaatcgcctgaactggacgagttgctttttttcgctaagcaa
attgaagggttgccaaggcatgcatcgacccatgctgcaggagtaattattagcgacaag
ccacttaacaataaaacagcgttgcagttagggatcgacggtcatgcggtgacgcaagcg
gatatggatagtttggcgcgtctagggcttgtgaaatttgactttttagggctgcgcaat
ttgacgttgcttgaacggatgctcaaagtaattgaacaagaagagggtgtcgcattaaat
ttgcagcatatcccactcaatgataaagccactttccagctgcttcaacaagggaaatca
acgggaattttccaacttgagtcggcaggcatgaggcaagtgctgaaacagttgcagcca
agccagtttgaagacattgttgctacaagtgctctttatcggccaggaccaatggcattt
attccagaatacatccgtggcaaacatggacacacgcaagctattgttccccatgaatcg
ctgcgtccaattgtcgagcctacttttggcgttctcgtttaccaagagcaaattatgcaa
gtcgtgcaggcgacggccaattatagtttagctgaagcggatttgttccgtagggccatt
agcaaaaagcaacatgatgtcatcattcaagaaagacaccaatttattcaccgggctgtc
gaaaacgggtttttgcctgaagaggcagaggctatattttcattaattgagcggtttgcc
aattatggctttcctaaaagtcatgccacagcttacagtttcattagctactggcttgct
tatttgcgtgtccattttccagctgccttttttgctgcgcttttttcctcagtttggcaa
aatcacgaaaaattgtattcgtatataaacgaggcgaaaaaagaaggcattcgtgtgctg
cctccgtctgtttgcaaaagcggcctgctatttgaacttgaaaatggccaaattcgcttt
ggtcttttgccaatttctggtgttaacgtccaagcggtcaatgaaatcatcagcaagcgg
cgaaaaaacagcgacagcaacttgtttatgttttacgcccatgttgcctcaacggctgtc
aacaaacgggtaatggaagctcttattaaagctggggcattggatgagtttggccaatcg
cgagcgacgctgctcggcaacttggataaagcagaagcttttgttgagcaagtccgttcg
tttaaagcatcttcaggagggctgtttacaatcaagcctgccgttccagcttacttggat
gtgacgccgtctacgaaaatggaagatttagaaggggagcgtgaagtgcttggcttttat
ttatcgggccacccaattgaaaatgaactagagcggctagcaccattcggtcgtatccct
ttagctgaatgtatcccttcaagaaagccagtacgaattgcgggaatggtcatcgatgta
aaaaaaatagtaacgaaaaaaggcgaagcgatggcctttttgactctgagcgacgaatcg
ggcgagtgtagttgcgtggccttcccccaagcgtggaaagtatatgaagggctgttcgcc
ccccacgcccttgtgtttttagaaggcgtattagaagaacggcaaggaaaaacgcagttt
attatccataaagcagctgatgttttgcaactaaacaaaaacaagaaaaaacaaacgctc
tatattcgtctaacggcggacaaagatcagcctacacgcctgagcgacttaaaatatgtg
ctaagccaagatgtcggttcaacacaagtgattctttacagagaaaaagaacaggcgcga
acgcgccttgcagatgaatacagtgtcgcgccaacaaggaagacgcttcagttattaaaa
caaatgtttggcgaagagaatattgtgctaaaaagcgacgaagagtaa
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integrated database retrieval system
