Shouchella clausii: ABC3086
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Entry
ABC3086 CDS
T00228
Symbol
degU
Name
(GenBank) two-component response regulator of extracellular degradative enzyme
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
bcl
Shouchella clausii
Pathway
bcl02020
Two-component system
bcl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABC3086 (degU)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABC3086 (degU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
bcl02022
]
ABC3086 (degU)
Two-component system [BR:
bcl02022
]
NarL family
DegS-DegU (multicellular behavior control)
ABC3086 (degU)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4
Sigma70_r4_2
B12-binding
OB_RRP5
Motif
Other DBs
NCBI-ProteinID:
BAD65620
UniProt:
Q5WDE0
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Position
complement(3206650..3207357)
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AA seq
235 aa
AA seq
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MITQETQEIRIVIIDDHPLFKEGVKRILSMEENFNVVADGEDGSEVIDLVRQHQPDVILM
DINMPKTNGVEATKDLIKAFPKVKVIILSIHDDESYVSHVLRTGASGYLLKEMDAESLVE
AVKVVASGGAYIHPKVTSNLIKEYRRLARQDEQYQDSIGFREVEYRKPLHILTRRECEVL
QLMTDGQNNRAIGESLYISEKTVKNHVSNILQKMNVNDRTQAVVESIKKGYVIVR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgattactcaagaaacacaagaaattcgcattgtcattatagacgaccatccattgttt
aaagaaggggtaaaacggattttatcaatggaggaaaattttaatgttgtggcagatggg
gaagacggatcggaagtaatcgatttggttcgccaacatcagccagatgtcattttaatg
gatattaatatgccaaaaacgaatggcgtcgaagcaacaaaagacttgatcaaggcattt
ccaaaagtgaaagtaattattctttcaattcatgatgatgagtcttatgtttcccatgta
ttacgaacaggagcctcaggttacttattaaaagaaatggatgcggaatcattggttgaa
gctgtaaaagtagtggcatccggcggcgcttatattcatccaaaagtgacgtcaaattta
attaaagaataccgccgccttgctcgccaagatgaacaataccaagactcgatcgggttc
cgtgaagtcgagtataggaagccgcttcatattttaactaggagagagtgtgaagtgctt
cagcttatgacggatgggcaaaacaaccgggcaatcggcgagtcgctttacataagcgag
aagacagtgaaaaaccatgttagcaacattttgcaaaaaatgaacgtgaatgaccgaacg
caagcagtggtagagtccataaaaaaaggatatgtcatcgttcgctaa
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