Shouchella clausii: ABC3152
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Entry
ABC3152 CDS
T00228
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bcl
Shouchella clausii
Pathway
bcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABC3152 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC3152 (alkA)
Enzymes [BR:
bcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ABC3152 (alkA)
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABC3152 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
BAD65686
UniProt:
Q5WD74
LinkDB
All DBs
Position
complement(3277682..3278593)
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AA seq
303 aa
AA seq
DB search
MTWHEINDEMIIALPEEFDMNANLGYLKREKNECMYETENDHITRMIAIGEIRSLIQISV
IDNKQMVVQFLNDSRPSEEWQREKIVKYIHEWFDLNTDLTPFYEMAKADPLLKKTVETFY
GLRVVGIPDLFEALCWGVLGQQINLAFAYSLKKQFVEGFGDSIEWNGKKYWVFPPYERIA
QLTPTDLAGIKMTVKKSEYIIGIAKLMASGELSKEKLIKMDFKDAEKNLIQIRGIGPWTA
NYVLMRCLRFPAAFPIDDVGLHNVIKLLTGSETKPTKKEIKQYAAAWTNWEAYATFYLWR
TLY
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgacatggcatgaaatcaacgatgagatgattattgcattacctgaagagtttgacatg
aatgctaacctaggctatctaaaaagagaaaaaaatgaatgtatgtatgaaactgagaac
gatcacattacaagaatgatagccattggggaaattcggtccttgatacagataagcgtc
attgataataaacaaatggttgtccagtttttaaatgattctagacctagcgaagagtgg
caacgagaaaaaattgtaaaatatattcatgaatggtttgatcttaataccgatttaacc
ccattttatgaaatggcaaaagcagatccattacttaaaaagacggttgaaacattttat
ggattgcgagtcgtcggcattcccgatttatttgaggctttatgttggggtgttctaggg
cagcaaattaacttagcgtttgcatactcattaaagaagcaatttgtagaaggatttggc
gattccatcgaatggaatggtaaaaagtattgggtattcccaccgtacgaacgaattgca
cagttaacacctaccgacctagcaggtattaaaatgacggtaaaaaaaagtgaatatatc
attggaattgccaagcttatggcaagtggagaattgtcgaaggaaaaattaataaaaatg
gactttaaagatgctgaaaaaaacttaattcaaatacgaggcatcggtccttggacagcc
aattatgttctgatgcgctgtttgcgatttcctgccgcttttccaatcgatgatgtcggt
ttgcataatgtaattaagctactcacaggatccgaaacaaaaccaacaaaaaaagaaatc
aaacagtatgctgccgcttggacaaattgggaagcctatgcaacgttttatttatggaga
accctatattga
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