Shouchella clausii: ABC3208
Help
Entry
ABC3208 CDS
T00228
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
bcl
Shouchella clausii
Pathway
bcl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABC3208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcl02000
]
ABC3208
Transporters [BR:
bcl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABC3208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
Rad17
AAA_22
AAA
AAA_16
nSTAND_NTPase5
SMC_N
AAA_5
NPHP3_N
AAA_19
AAA_30
NB-ARC
SRP54
AAA_23
AAA_25
RsgA_GTPase
TsaE
Motif
Other DBs
NCBI-ProteinID:
BAD65742
UniProt:
Q5WD18
LinkDB
All DBs
Position
3326923..3327978
Genome browser
AA seq
351 aa
AA seq
DB search
MALLTLDQVTVAYQKQDILKQFDLKIEKGELLSLLGPSGCGKTTTLRLIAGFLESKSGRF
LFNDKDYTRVPVSKRNFGFVFQNYALFPHLSVYNNIAFGLKMRKQTQSEMKKRIAHVLDV
VNLTGFENRFPKELSGGQRQRVAIARALVIEPDLLLFDEPLSNLDANLRETMRVEIRRIQ
QELGITAVYVSHDQEECFSISDNVAIMNKGIIEQLDAPSHIYSYPKTRFVAEFIGFKNFL
PFSDREDNGAYWTLASGAQRFSVAKHAGSDLGMTGAIRPDDIELVLDLNQGDAANHIAGK
VLVCTFLGRSYQCIVETAAGTFTVHTDMATPLDIGTPVVLHFPSNKIIITQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggctttactaacattagaccaagtgacggtcgcttaccaaaaacaagacattttaaaa
cagtttgatttaaaaatcgagaaaggcgagctcctttccttactaggaccaagtggctgt
ggaaagacgacgacattgcgcctcattgctggttttctcgaatcgaaatctggccgcttt
ctatttaatgacaaagattacacacgtgtccccgtttcgaaacggaacttcggctttgtt
ttccaaaactatgcgctttttcctcatttgtctgtgtataacaacatcgcctttggctta
aaaatgcgcaaacaaacgcaaagcgaaatgaaaaaacggattgcccatgtcctcgatgtc
gttaatttaacagggtttgaaaatcgttttccaaaagaactgtctggcgggcaacgccag
cgtgtcgcgatcgcccgggcattagtgattgaacctgacctgttgttgtttgatgaaccg
ttaagcaacttggacgcaaacttgcgtgaaacaatgcgcgtggagattcgccgcattcaa
caagaactcggcattacagctgtatacgtctcccatgaccaggaggaatgcttttccatt
tccgacaatgtcgcgattatgaataaagggatcattgaacagctcgatgccccatcccat
atttatagctatccaaaaacgcgctttgttgctgaatttatcggctttaaaaacttcttg
ccattctcagacagggaagacaacggagcttattggacacttgcctctggcgcacaacgc
ttttcagtcgccaaacatgccggctcggatttaggcatgacaggagcgatccgccctgac
gacattgagcttgttctcgatttaaaccaaggggacgctgccaaccacatagctggaaaa
gtgcttgtctgcacctttctcggccgaagttaccaatgtatcgtagaaacggcagccggc
acgtttaccgtccatacggacatggcgacgcctcttgacattggcacgcctgtcgtcctt
cattttccaagcaataaaatcattattacccaataa
DBGET
integrated database retrieval system
