Shouchella clausii: ABC3488
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Entry
ABC3488 CDS
T00228
Name
(GenBank) AraC/XylS family transcriptional regulator
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
bcl
Shouchella clausii
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcl03000
]
ABC3488
Transcription factors [BR:
bcl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ABC3488
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
BAD66021
UniProt:
Q5WC89
LinkDB
All DBs
Position
complement(3621084..3622613)
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AA seq
509 aa
AA seq
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MRDWKEALIRLEKTTTSTVSLVHSMAYADTYMLCFVQSGSLAVQVNDTKASLSPYHFYLL
KPGDAYHFPGEGAEIALFRFRMYEPRENGELLQATNWHFPRRKGCANEKTADLAAALLRK
NKYAFFWNQVQFPDLLYRCLEEGSNISMSGIELAKQYIEENPHARISLKTLAGLSGLHPS
YLSEKFAQQTGKSVSQYAAEVKLTEAKRLIQTTTLPLKDIAHRIGYDDEFYFSRKFKKEV
GLSPSQYREKKMRKLAAYDLDSLGDLLALRQIPFAAPMHPKWTKHYYELYQHEVPVHLSA
YRANHDWQANMERLIDWKPDVLIAKRKLHEEERNAFTVSIPTFIDLSNAGSWKDQFIVVA
EALHEQNEAQRFLSHYEETAVACKQSIEKENTASPVILRIAGEGIYLYTNPGISSLFHDV
GFEGWQQSAAPLSLLELKELAPRWLWVLCLHDSQTKTFYEHVRQSEEWNGLPAVRTGQVK
HLPSDLWFEYSAFAQWRKLLFLRSQLQSM
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgagagattggaaagaagcgctgatccgtttggaaaaaacgacaacaagcactgtctct
ctggttcatagcatggcatacgcggacacgtatatgctttgctttgtccagtccggttct
ttggcggtccaggtaaacgatacaaaggcatcgctgtccccctaccatttttatctttta
aaacctggggatgcctaccattttccaggcgaaggcgcggaaatcgccctctttcgtttc
cgtatgtatgaaccgagagagaatggggagttgctgcaagcgacaaattggcattttcca
agacgaaaaggatgtgcaaatgagaaaacggcagatcttgcagctgctcttttgagaaaa
aacaaatatgcgtttttctggaatcaagtccaatttccagacttgttataccgctgtctg
gaagaaggcagcaatatctcgatgagcggaattgaattggcaaagcaatatattgaagaa
aatccccatgcccgtattagcttaaaaacgttggcgggattatcaggcctccatccgtca
tatttaagcgaaaagtttgcgcaacaaacgggcaaaagcgtgtcacaatatgcagcggaa
gtcaaattaacggaagcaaaacggcttattcaaacaacgacgttgccccttaaagacatt
gcacatcggatcggctatgacgatgaattttattttagcaggaagtttaaaaaggaggtt
ggcctttcgcctagccagtatagagagaagaaaatgcggaaactggccgcctacgatctt
gattcgctaggtgatttgcttgctttgcggcaaattccatttgctgcgccgatgcacccg
aaatggacaaagcactattatgagctataccagcacgaggttcctgtccatttgagcgct
taccgggcgaatcatgattggcaagcaaatatggaaaggctgatcgactggaaaccggac
gttttaattgcgaaaaggaaactccatgaagaagaacggaatgcctttactgtctccatt
cctacttttatagatcttagcaatgctggaagttggaaagaccagtttatcgtcgtcgcc
gaagccttacatgaacagaatgaagcacagcggtttcttagccactatgaagagacagca
gtcgcttgcaaacaatcgattgagaaagaaaacacggccagtccagtcattttgcggatt
gcaggcgaagggatttatttgtatacaaacccaggcatttcaagtttgtttcatgacgtt
ggttttgaaggctggcagcagtcggcagcaccgttgtctttgcttgagcttaaagaattg
gcgccgagatggttgtgggtgctttgcctccatgacagccaaacaaagacgttctatgaa
catgtccggcaaagtgaagaatggaacgggctgcctgctgtaagaaccggccaagtcaaa
catttgccttctgatttgtggttcgaatactctgcctttgcccagtggcgcaagcttctt
tttctccgctcccaactacagtccatgtaa
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