Shouchella clausii: ABC3496
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Entry
ABC3496 CDS
T00228
Symbol
msmE
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
bcl
Shouchella clausii
Pathway
bcl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ABC3496 (msmE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcl02000
]
ABC3496 (msmE)
Transporters [BR:
bcl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
ABC3496 (msmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_6
SBP_bac_11
Spiro_OB_C
Motif
Other DBs
NCBI-ProteinID:
BAD66029
UniProt:
Q5WC81
LinkDB
All DBs
Position
3632180..3633541
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AA seq
453 aa
AA seq
DB search
MNTKTFTPTQDANVNVYYNLRRKILTRPRKGSIYCFLLGKESFSMKQILTIFLAFTSLLF
MASCNGESSSDGVVELELFSNKTENINTYQKLIDQFEAEHEGIRINLYAPPDAETLLRTR
LVKNDMPDMLAIGGNALYGELAQANLLVDYEETSLLDGIQPAYLEMVQELQGPKQTGIYG
VPFAANANTVIYNKTKLEELGLDVPTTWEEFVAALEIAKQAGEIPIYYTLQDAWTALPLW
NAVAGVLQPDEFAAQKTAGSLTFQATHTEVTSKIQTLLDYGHDRMYGIGYDDGNRAFAQE
NGLFYFQGNWAVPELLTTNPNLDLGVFPLPVTDDTEQNKLVSGVDVLFATLKDTNHPEEA
KAFISFMLEEAPAEQYMAEQSAFSVLEGVLTDDPYMEGIREHFAQGNIASFPDHFYLPGM
GVENMIQEFMYRGNEQDFLKRMDREWDQTQLRY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaaaacgtttactcccacgcaggacgctaacgtaaacgtttactataatttg
cggagaaagatattaactcgcccgcgaaaaggatcgatctattgttttttattaggaaag
gagtcgttttccatgaaacaaatcctgaccatattcttggcgttcacgtctctcctgttt
atggccagctgcaacggcgagtcttctagcgatggggttgttgaactcgaattgttttcg
aacaaaacggaaaacatcaacacgtatcaaaagctaattgaccaattcgaagccgagcac
gaaggcattcgcattaacctttatgctcctcctgacgctgagacgttgctgcgtacacgg
cttgtcaaaaatgacatgcccgacatgttggcgattggcggaaatgccctatatggcgaa
ctggcgcaagccaatttgctcgttgattatgaagagacgtctctattggacggtatccag
ccagcctatttagaaatggtacaagagctgcaagggccaaagcaaaccggtatctacggc
gtgccgtttgccgcgaacgccaatacggtcatttacaacaaaacgaaattggaggaactt
ggccttgatgtgccaacaacgtgggaggagtttgttgccgctttagaaatagcaaaacag
gctggcgaaattccaatttactatacgttacaagatgcttggactgcactgcccctttgg
aatgctgttgccggtgttctccagcctgacgaatttgctgctcaaaaaacagcaggctcc
ctcacattccaagctacacatacggaagtaactagtaagattcaaacattgcttgattat
ggccacgaccgcatgtacgggattggttacgatgatgggaaccgtgcgtttgctcaagaa
aacggcctcttctatttccaaggcaactgggctgtacctgaattgttgacaaccaatcct
aacctagatttaggcgtcttcccactccccgtcaccgatgacactgagcaaaataaactc
gtttctggcgtcgatgtcctgtttgcaacgcttaaagacaccaatcacccagaagaagca
aaagcgtttatctcattcatgctagaagaagccccggcagagcaatatatggctgaacaa
tcagcgttttctgtgttggaaggcgttctgactgacgatccttatatggagggaattcgt
gaacattttgcacaagggaatattgccagttttcctgaccatttttatttgccgggaatg
ggcgttgaaaatatgatacaggagtttatgtacagaggaaatgaacaagatttcttgaaa
cgaatggaccgggaatgggaccaaacccaactgcggtactag
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