Shouchella clausii: ABC3521
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Entry
ABC3521 CDS
T00228
Symbol
lacR
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
bcl
Shouchella clausii
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcl03000
]
ABC3521 (lacR)
Transcription factors [BR:
bcl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ABC3521 (lacR)
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GFIT
Motif
Pfam:
Peripla_BP_3
LacI
HTH_Tnp_ISL3
HTH_24
MarR
HTH_23
Sigma70_r4
HTH_38
HTH_28
HTH_3
HTH_11
HTH_Crp_2
HTH_AraC
Trp_repressor
HTH_IclR
PI3Ka
TrmB
HTH_10
TnsD
MerR
Motif
Other DBs
NCBI-ProteinID:
BAD66054
UniProt:
Q5WC56
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Position
complement(3659174..3660166)
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AA seq
330 aa
AA seq
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MATIKEIAEKAGVSITTVSRVLKQDPTLSVTQETREKVYETAQRLGYTKKRFKHSLKKIA
FLYWITEKEDLQDVYFQTVKKGVEEEANERQLNLTTYSIGDGIEAIDPQTKGVICLGRFS
KRELDYIRTLTNDVVFIDTSPDEDHFDSVRPHLRRMIERMIDYYLENGHTAIGYIGGNDF
DADCGGYIPDRRERAFKEYMEKKGLFDERFLFVGDQYAVNEGYALMKRAIHSLGDQLPTA
FCVASDSLAVGCLQALNEERIALPERVNVFSINDASIAQYVSPPLTTFRIDVKLLCQTAI
DLLLERLVDKRTSPKTVLMSCNPIFRKSTG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
ttggctacgataaaggagattgctgaaaaagcaggtgtctctattacgacagtttcgcgt
gtgctcaaacaagaccccactttatctgtgacgcaagagacgagggaaaaggtgtatgaa
accgcgcaacggttaggctatacaaagaaacgatttaaacattcgttaaagaaaattgct
ttcttgtattggattacggaaaaagaagatttgcaggacgtttattttcaaacagtgaag
aaaggcgttgaggaggaggcaaacgaacggcagcttaacttaacaacgtattcgatcggt
gatggaattgaggcgatcgacccgcaaacaaaaggcgttatttgccttgggcgctttagc
aagcgtgagctagattatatccgtacgttaacaaacgacgtggtgtttattgatacctcg
cctgatgaagaccatttcgattctgtacggccccatctccgcaggatgattgaacggatg
attgattactacttggaaaatggtcatacagcgattggttatattggcggcaatgatttt
gatgccgattgtggtggttatattcccgatcgcagagagcgtgcttttaaagaatatatg
gagaaaaaagggcttttcgatgaacggtttttgtttgttggcgaccaatatgctgtaaat
gaaggctatgctttgatgaaacgagcgatccactcccttggcgaccagttgccgacagca
ttttgtgtagcaagcgactctcttgccgttggctgtttgcaagccttaaatgaggaacgg
attgcgttgccggagcgggtaaatgtttttagtataaatgacgccagcattgcccaatat
gtttctccgccgttgacaacttttcggattgatgtaaagcttttgtgccaaacggctatt
gacttgttattagaacggctcgtcgataaaaggacttctccaaaaacggtgctcatgtca
tgtaaccccatctttcgaaaaagtactggctaa
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