Shouchella clausii: ABC3887
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Entry
ABC3887 CDS
T00228
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bcl
Shouchella clausii
Pathway
bcl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABC3887 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcl03021
]
ABC3887 (rpoE)
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC3887 (rpoE)
Transcription machinery [BR:
bcl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABC3887 (rpoE)
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABC3887 (rpoE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
BAD66418
UniProt:
Q5WB42
LinkDB
All DBs
Position
complement(4043425..4043931)
Genome browser
AA seq
168 aa
AA seq
DB search
MDLQSLTKEELNEMSMVEAAFIVMANKRQPFNFYDLLEEVAKLKGISETEMDERISFLYT
DLNLDGRFLTLGDNTWGLRSWYPHEQAEEEITHSAKPAKRRKSGDDDGEEEYDLVDELEE
DEFEDLEDELDELADEEDQDGERDDYDEKDDALPGFDEEDGQTLDEED
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
gtggatttgcaatccttgacaaaagaagagttgaacgaaatgtcaatggtagaagccgct
tttattgtaatggcaaacaagcggcagccttttaacttttatgatctccttgaagaagtc
gctaagctaaaaggaatatcagaaacagaaatggatgagcggatttcattcttatataca
gatttaaacctggacgggcgctttttaacgcttggcgataacacgtggggtttgcgctct
tggtatcctcatgaacaagcggaagaggaaattacacactctgctaaaccagccaaacgt
cgcaaatcaggcgatgacgacggggaggaagagtacgaccttgtcgacgagcttgaagag
gatgagtttgaagacttggaagatgaactggacgagttggctgatgaagaggaccaggat
ggcgaacgggatgactatgacgagaaagatgatgcgctgccaggatttgacgaggaagac
ggtcaaacgcttgatgaggaagattaa
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