Shouchella clausii: ABC3930
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Entry
ABC3930 CDS
T00228
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bcl
Shouchella clausii
Pathway
bcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABC3930 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC3930 (ung)
Enzymes [BR:
bcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABC3930 (ung)
DNA repair and recombination proteins [BR:
bcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABC3930 (ung)
Prokaryotic type
ABC3930 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF6833
Motif
Other DBs
NCBI-ProteinID:
BAD66461
UniProt:
Q5WAZ9
LinkDB
All DBs
Position
complement(4086344..4087042)
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AA seq
232 aa
AA seq
DB search
MPILRNDWNDVIGGEFQKTYYLELREFLKREYKEQTVYPHMNDLFNAFHYTPFEQVKVVI
LGQDPYHGPNQAHGLSFSVKPEVAVPPSLKNMYKELQDDLGVTPVDHGYLQPWADQGVLL
LNTVLSVRKRQPGSHKGKGWELFTNEVIHALNKREEPVAFVLWGRHAQAKKEAIDATRHL
IIESAHPSPFSANRGFFGSRPFSKINHWLQEQGKAPVDWQLPMKAELYSYGK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcctattcttcgtaacgattggaacgatgtgattggcggcgaatttcaaaaaacgtat
tacttagagctgcgtgaattcttgaaacgagagtacaaagagcagacggtctacccccat
atgaatgatttgtttaatgctttccactatacgccgtttgaacaagtgaaagtcgttatt
cttgggcaagacccttatcatggcccaaaccaagcccatggattaagtttttctgttaaa
ccggaagtggctgtcccgccatcgctcaaaaatatgtataaagaattacaagacgatttg
ggcgttacgcctgtagaccatggctatttacagccgtgggccgatcaaggcgtgctgttg
ttaaacactgtgctcagcgtccgtaaaaggcagccaggctcccataaaggcaaaggctgg
gaactgtttacgaacgaagtcattcacgctttaaataaacgggaagaaccagttgcattt
gtgctgtggggaaggcatgcccaagcgaaaaaagaggcgattgatgcaacacgccatttg
attatcgagtcggcccacccgagccctttttctgcaaatcgaggtttctttggcagccgc
ccgttctcaaaaatcaaccattggctgcaggaacagggaaaagctccggtcgattggcag
ctgcctatgaaagcagagctctactcttatgggaagtaa
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