Shouchella clausii: ABC4117
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Entry
ABC4117 CDS
T00228
Symbol
thdF
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bcl
Shouchella clausii
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcl03016
]
ABC4117 (thdF)
Transfer RNA biogenesis [BR:
bcl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ABC4117 (thdF)
Prokaryotic type
Methyltransferases
ABC4117 (thdF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
GTP_EFTU
MMR_HSR1_Xtn
Ras
Roc
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAD66648
UniProt:
Q5WAG3
LinkDB
All DBs
Position
complement(4299812..4301188)
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AA seq
458 aa
AA seq
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MEMDTIAAISTALGEGAIGIVRLSGDQAIAIGDKLFKGTKRLEDTPSHTIVYGHLMDDAS
EEAIEEAMVTVMRAPRTYTREDIVEINCHGGLVSVNRVLQAVLAKGARLAEPGEFTKRAF
LNGRIDLSQAEGVIDLIRSKTDRAMNVALRQVEGRLSKKIGKLRQALLETIASIEVNIDY
PEYDAETMTAKLINEKMTIVLAEIEALLATAKQGKVLREGLATAIIGRPNVGKSSLMNSL
VHEAKAIVTDIPGTTRDTLEEYVNVRGVPLRLIDTAGIRETEDIVERIGVERSRQALKEA
DLILLVLNYAEKLSKEDEALFEAVKGLDVVVIVNKIDQTGRIDMERVRQLAGENPVVATS
FLQEEGVDQLEEAISRLFFAGGVEGADLTYVSNARHIGLLNQAKAHAEEAIAASLTDVPV
DLIQIDVTRTWELLGEIIGEDVQDSLIDQLFSQFCLGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatacaattgcagcaatatcgacggcacttggagaaggggcgattgggatt
gtccggctgagcggagatcaagcaattgcgattggcgataagttgtttaaagggacaaag
cgtttagaagacacgccgagtcacacaattgtgtatggccatttaatggatgatgctagc
gaggaagcgattgaagaagcgatggtcacggttatgagagcgcctaggacctatacacgt
gaagacattgtggaaatcaattgccacggcgggcttgtgtctgtgaaccgtgtgcttcaa
gctgtgctggcaaagggagctcgattggctgagccgggagaattcacaaagcgcgctttt
ttaaatggccgtattgatttgtcgcaagcagaaggcgtcatcgacttaatccgttcaaaa
acggatcgggcaatgaatgtcgcattgcgccaagtggaagggcgtttgtccaaaaaaatt
ggcaagttgcgtcaagcccttttagaaacaattgcttcgatcgaggttaacattgattat
ccagagtatgatgcggagacaatgacagctaagcttataaatgaaaaaatgaccattgtt
ttagcggaaattgaagcgttactcgcaactgccaaacaagggaaagtgttacgggaaggg
ctcgccactgccatcattggcaggccaaatgttggcaagtccagtttgatgaacagcctt
gtccatgaagcaaaagcgattgtgaccgatatacctggaacaacgagagatacgcttgaa
gagtatgtcaatgtccgcggcgttcctcttcgccttattgatacagctggtattcgtgaa
acggaagacattgtcgagcgaattggcgttgaacggtctcgccaagcgctcaaagaagcc
gacttaattttgcttgttttaaactatgcagaaaaactttcaaaagaggatgaagctttg
ttcgaagcggttaaaggactggatgtggtcgtgatcgtcaataaaatcgaccaaacaggg
cggattgatatggagcgtgtccgccaactagcaggagagaatccagtcgtggcgacttcc
ttcctccaggaagaaggagtcgaccaattagaagaagcaattagtcgtttgttttttgct
ggtggagtggaaggcgctgatttgacgtatgtgtcaaacgcccgtcatattggtttacta
aaccaagcaaaagcccatgctgaagaagcgattgctgcaagtttaaccgatgttcctgtt
gatttgattcaaattgatgtgacacggacgtgggaattattaggcgaaattattggagaa
gatgtccaagatagtttaattgaccagttgttctcgcaattttgtttaggaaaataa
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