Bucephala clangula (common goldeneye): 308440591
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Entry
308440591 CDS
T11949
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
KO
K06099
cold shock domain protein A
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
308440591 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcla03000
]
308440591 (YBX3)
03041 Spliceosome [BR:
bcla03041
]
308440591 (YBX3)
Transcription factors [BR:
bcla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
308440591 (YBX3)
Spliceosome [BR:
bcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
308440591 (YBX3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
308440591
NCBI-ProteinID:
XP_080799080
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All DBs
Position
1:complement(126882070..126901617)
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AA seq
293 aa
AA seq
DB search
MSQAAENSAAATAPTDTTTTAAADGALPALPAAAPDAKPKSPGGAATTTTEAPGAAAAAA
PAAAAPATTGAAETEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNP
RKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGP
PRSGVEGEIKDGITEGGQLNQQVHRNPTYRPRYRRGPPRPRPAPVAGEAENKENQHEANA
MSQQPIRRGYRRPYNYRRRPRPPNASAQDGKETKVTETPAENPAPVTEQSGAE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcggcggagaacagcgctgcggccacggcgcccaccgacaccaccaccacc
gcggcggctgacggagccctgccggcacttcccgcagccgccccggacgccaagcccaag
agccccggcggcgccgccaccacgaccaccgaggcgcccggtgctgctgcagccgctgcc
cccgccgccgctgcccccgccaccaccggggcggcggagacggagaagaaagtgctggcc
acaaaagttcttggcaccgtcaagtggttcaacgtgagaaatggatatggctttatcaac
agaaatgataccaaagaagatgtgtttgttcatcagacggcaataaagaaaaacaatcca
cggaagtatttgcgcagtgttggtgatggagagactgtagaatttgatgtggtcgaggga
gagaagggtgcagaagcagctaatgtcactggtccagatggagtccctgtagaaggcagt
cgctatgctgcagaccggcgccgctatcgacgtggctattttggccgacgccgtggacca
cctcgaagtggtgttgagggagaaatcaaggatgggatcacagaaggaggacaacttaat
cagcaagtccataggaatcctacgtatcgtccccgctaccgcagaggtcccccacgtcca
cgccctgccccagtggcaggagaggctgaaaacaaagagaaccagcatgaagccaatgct
atgagtcagcagccaattcgccgtgggtataggcgcccgtacaactaccggcgtcgacct
cgtccacccaatgcgtcagctcaggatgggaaagagacaaaggtgactgaaacacctgct
gaaaatcctgctccggtgacagagcaaagtggtgccgagtaa
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