Bucephala clangula (common goldeneye): 308441542
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Entry
308441542 CDS
T11949
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
308441542 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcla03021
]
308441542 (TAF4B)
03036 Chromosome and associated proteins [BR:
bcla03036
]
308441542 (TAF4B)
Transcription machinery [BR:
bcla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
308441542 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
308441542 (TAF4B)
Chromosome and associated proteins [BR:
bcla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
308441542 (TAF4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
308441542
NCBI-ProteinID:
XP_080800772
LinkDB
All DBs
Position
3:<42455582..>42524161
Genome browser
AA seq
825 aa
AA seq
DB search
MSAPAAAPAGLLPAGHPEQAASTAAASPAASSTASSSSSSSSSSSSKAPSAPPPAAVLRV
AAGGAPRPAVAPKGPPAATIQLPPGTVLIRSSNGQLMLVSQRAIARAQTQPQNNTSVQPS
VPSSTPTVRICAVQNSGTQLLKKAVVTPVKTLSQTTNAVVSTVQPPAVIQPAAATASVTT
VTAVKPSSTGTPVKLPVTGPPAQSISQKAVSVKAEGTTVAQTSASAEMLENVKKCKNFLA
TLIKLASSGPQAPEMGQNVKNLVQNLLEAKIEPEEFTKKLYIELKSSPQPYLVPFLKKSM
LALRQLMPNAQSFIQQCMQQPAPAQEAVSSCTSAPTPTAVAASAVATNSLPVIKPAPASA
TVAASPVTKPVLPSAPVTASLQTVKPVPASAVVTASLRPAASVLTTTTVTSGLTAIQTVK
PVFTSAVATSSLQPVKPVLVSAVASSAATPLQPLKPVIGTPISIKISQPNSIVAQSAGAQ
QVVKVKQLVVQQPSGAIVKQVSTLPQPSTLTLQTSAEKRMPLNTLVQTNKFPAGSILKQV
TLPGNKILSLQASPVQKTKIKENGTTSFRDEDDINDVTSMAGVNLSEESEYILATNPELI
GTVIRSCADEPFLSSEALQKKILNIGKRHDIVELNSDVVNLISHATQERLRGLLEKLTVI
AQHRVSTHKGSDKYIVSSDTRAQLRFLEKLAHLERQRKDEEEREMLLRAAKSRSNKEDPE
HLRLKQKAKEMQQLELAQMQQREANVTALAAIGPRKKRPLDSSNAGSGLEGLNGNGVAPG
SSNFSLTKQLLRPRITRVCLRDLIFCMEQEREMKHSLTLYRALLK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccggcggccgccccagccgggctgctgcccgccggccacccggagcaggcg
gcgagcaccgcggccgcctccccggctgcctcctccaccgcctcctcctcttcctcctcc
tcctcctcctcctcgtccaaggcgccctccgccccgccgcccgccgcggtgctgcgggtg
gccgccgggggggctccgcggccggcggtggctcccaaggggccgcccgccgccaccatc
cagctgcccccaggaactgttcttatcagaagcagtaatggtcaactaatgctggtatct
caacgagcaatagcacgagcacagactcagccacaaaataacacaagcgtacaaccgtct
gtacctagcagcacacctacagtcagaatatgtgctgtacagaactctggcacccagtta
ctaaagaaagcagtagttactcctgtgaaaacgttatctcaaacaacaaatgctgtggtt
tctactgttcagccacctgctgtaatacagccagcagctgcaacagctagtgttactaca
gttactgctgtaaagccttcgagtactggaacacctgtaaaacttccagttacaggacca
cctgcacaatccatctcccagaaggcagtctctgtgaaagcagagggcacaacagtagca
cagaccagcgcttctgcagagatgttagagaatgtgaagaaatgcaagaatttccttgct
acgctgataaaattggcatctagtggacctcaagctcctgagatggggcagaatgtgaag
aatctggtgcaaaatcttttggaagcaaaaattgaaccagaagaatttacaaagaagctg
tacatagagctcaagtcttctccacagccgtatttagttccttttcttaagaaaagcatg
cttgccttacggcagctgatgccaaatgcccaaagctttatccagcagtgtatgcagcag
ccagccccagcccaagaagctgtttcaagttgtacctctgcaccaactcctacagcggtg
gcagcctcagctgtagcaacaaattctcttccagttataaaaccagcgcctgcctctgca
actgtcgcagcctctccagttacaaaaccagtccttcccagtgccccggtgacagcctct
ctgcagactgtgaagcctgttcctgcctctgcagtggtgacagcctctctccgtcctgca
gcatcagtcctcaccacaacgacagtgacatcggggctgactgctatccaaactgtgaag
ccggtcttcacctctgctgtagcaacgtcctctctccagcctgtaaagccagtgctcgtc
tccgcagtggcgtcctcagcagcaacccctctccagcctttgaaaccagtcatcggcacc
cccatcagtattaaaatctcccagccaaactccatcgtcgcgcagtcggcgggcgctcag
caggtggtaaaagtgaaacagttggtagtccaacaaccgtcaggagccattgtaaagcaa
gtatccacactcccacagccctcaacgctgactctccagacatctgctgagaagaggatg
ccgctgaatacgcttgtgcaaaccaacaaatttcctgcaggttccatcctgaaacaagtt
accctgccaggaaataaaattctgtcgcttcaagcatctcctgttcagaaaactaaaata
aaagagaatggaacaacatccttcagagatgaagatgacataaatgatgtgacttctatg
gctggggtcaacctgagcgaggagagcgagtacattctggcaacaaatcctgaactcatt
ggtacagtgatccgctcttgtgcagatgaaccttttctctcttcagaagcacttcagaag
aagatcttgaacattggtaaaaggcatgacattgtggaacttaactctgatgttgtgaac
ttgatctcccatgctacacaggagagattacgagggctcctagaaaaactaactgtaatt
gctcagcacagagtatcaacccacaaggggagcgataagtacatcgtatctagtgatacc
agagcacagctgagatttctcgaaaagcttgctcacctagaaagacagagaaaggatgaa
gaagaacgcgagatgttactacgagcagccaagagccgttccaataaagaagatccagag
catctgcgtttgaagcagaaagcaaaagagatgcaacagttggagttagcacaaatgcaa
caaagagaagccaacgtcacagctttggcagccattggaccgaggaagaaaaggccattg
gattcatcaaatgctggatctgggctggagggtttgaatggcaatggagttgctcctgga
tcgtcaaattttagccttacaaaacagctgcttcgtccaagaataacccgtgtctgtctc
agggacttgatattctgcatggagcaagagagggagatgaagcactctcttaccttgtac
cgtgctcttctgaagtga
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