Bucephala clangula (common goldeneye): 308441927
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Entry
308441927 CDS
T11949
Symbol
DDX17
Name
(RefSeq) putative ATP-dependent RNA helicase DDX17 isoform 1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
bcla Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcla03041
]
308441927 (DDX17)
Enzymes [BR:
bcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
308441927 (DDX17)
Spliceosome [BR:
bcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
308441927 (DDX17)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
308441927
NCBI-ProteinID:
XP_080801415
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Position
4:complement(54475737..54494492)
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AA seq
655 aa
AA seq
DB search
MRGFGDRGRDRDRGGFGASRGGPLPPKKFGNPGERLRKRKWDLNELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERGDSYANGANKTYGS
AYGSPNSAFGAAQSQYGYTQGSYGAGAYGTSGYGTAEYSASGYGASTTAATAGRTSQSTT
QQQYAGMVGRSGQQPQPLMSQQFPQPPATNVMGYMGQTATYQYPPPPPPPPPSRK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcttcggggaccgggggcgcgaccgagaccgcggcggctttggagcaagtcgt
ggaggtcctcttcccccaaagaaatttggtaatccgggggaacgcttacgtaaaagaaaa
tgggatttgaacgaactacccaagtttgagaagaatttttatgtggaacatccagaagtg
gccaggcttactccatatgaagttgaagaactgagaaggaagaaagagataacaattcga
ggaatggagggctgccccaagcctgtgtttgccttccaccagtgtagctttccgcagtat
gtgatggatgccttgatggaccagaatttcacagaacccactccaattcagtgccaaggt
tttccactggctctcagtggtcgcgatatggtgggcattgcgcagactggctccgggaag
acgctagcgtacttgttgcctgcgatcgttcacatcaaccaccagccatatttggagaga
ggggatggcccaatttgcttggttctagcaccgaccagggagttggcccagcaggtgcag
caagtggctgatgattacggcaaatgttcaaggctgaagagtacctgcatatatggagga
gcacccaaaggtccccagatcagagatctagaaagaggtgtggagatctgcattgctaca
ccgggtcgcttgatcgacttccttgaggcaggaaagaccaacctgcgtcggtgtacctac
cttgtgctggatgaagcggacagaatgctggacatgggatttgaaccccaaattcgtaaa
attgttgatcagatcaggcctgacagacagactctgatgtggagtgccacctggccaaaa
gaagtgcgccagcttgccgaggacttcctacaggactacgttcagatcaacgtggggaac
ttggagctgagtgccaaccacaatatcctgcagatagtggatgtatgcatggaaagcgag
aaagaccataaactgatacaactgatggaagaaatcatggcagagaaggagaataaaacc
atcatctttgtggagacaaagaggcgatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagctatgtgtatccatggagacaagagtcagccggaaagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtggg
ctagacgtggaagatgtaaaatttgtgataaactacgactatccgaacagctctgaagat
tacgtgcaccgtattggccgcaccgcgcgtagtaccaacaaaggtaccgcgtacacgttc
ttcacgccaggaaacctgaaacaagccagggagcttatcaaagtgttggaagaagccaat
caagccatcaatccaaagctgatgcagcttgtggaccacagaggaggaggaggtggtggt
ggaggaggccgttctcgttaccgaacgagcagttcagtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcaggtggc
ttcagagaccgtgagcgtggtgacagttatgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattccgcttttggggcagcacagagccagtatggttacactcaa
gggagctatggagcaggtgcctatggcacgagtggctatggcactgcagagtacagtgct
agtggctatggtgccagcaccacagctgccaccgctgggagaacctcacagagcactacc
caacagcagtatgcagggatggtggggcgctcgggccagcagccacagccgctcatgtca
caacagtttcctcagccccctgccactaacgtgatgggctatatgggacagactgccacc
taccagtatccgccccctcccccgcccccgcccccctcacgcaaatga
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