Bucephala clangula (common goldeneye): 308443338
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Entry
308443338 CDS
T11949
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
bcla Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcla03000
]
308443338 (SOX1)
Transcription factors [BR:
bcla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
308443338 (SOX1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
308443338
NCBI-ProteinID:
XP_080803893
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All DBs
Position
1:complement(60948559..>60950006)
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AA seq
375 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPGSLSGQSGAGGGGGGGGGGGGGGSKGGQDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYR
PRRKTKTLLKKDKYSLAGGLLGAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTAGGG
YAHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGGGGHPHHPHPHHPHHPHNPQPM
HRYDMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGA
LGSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQ
SASTGVNGTVPLTHI
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccccggcggcgcccaggcccccggc
agcctctcggggcagagcggagcgggaggaggcggcggcggcggcggcggcggcggcggc
gggggcagcaaaggcggccaggaccgggtgaagcgccccatgaacgccttcatggtgtgg
tcgcggggccagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatc
agcaagcgcctgggcgccgagtggaaggtgatgtcggaggccgagaagcggcccttcatc
gacgaggcgaagcggctgcgggcgctgcacatgaaggagcacccggattataaataccgg
ccccggaggaagaccaagacgctgctcaagaaggacaagtactcgctggccggggggctg
ctgggcgccggctcggccgggggcggcccggcgggcgtcggcgtgggcatgggcgtcggc
gtcagccccggcggcgtcgggcagcgcctggagagccccggcggcacggccggcggcggc
tacgcgcacatgaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcg
gcggcggcggcgatgatgcaggaggcgcagctcgcctacggccagcacccgggcggcggg
gggcacccgcaccacccgcacccgcaccacccgcaccacccgcacaacccgcagcccatg
caccgctacgacatgggcgcgctgcagtacagccccatctccaactcgcagggctacatg
agcgcctcgccctcgggctacggcgccctgccctacggctcccagccccaccagaactcg
gcggcggcggcggcggcggcggcagcggcggcggccgcctcctcgggggcgctgggcgcg
ctgggctcgctggtgaagtcggagcccagcgtgagcccgcccgtcacctcgcactcgcgg
gccccgtgccccggggacctgcgggagatgatcagtatgtacttaccggccggggaaggc
ggcgatccggcggccgccgccgcccagagccggctccactccctgccccagcactaccag
agcgccagcacgggggtcaacggcaccgtccccttgacgcacatctga
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