Bucephala clangula (common goldeneye): 308443800
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Entry
308443800 CDS
T11949
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform 1
KO
K17925
sorting nexin-13
Organism
bcla
Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bcla04990
]
308443800 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
bcla04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
308443800 (SNX13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Rv2240c
DNA_pol3_delp_C
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
308443800
NCBI-ProteinID:
XP_080804677
LinkDB
All DBs
Position
6:complement(32290103..32358770)
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AA seq
968 aa
AA seq
DB search
MLAETSLSIWGWGSLGVVLFLITFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLE
QCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIA
EKGDQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
QSRQKDGKHQTNQTKGLLRAAAVGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
GSINLSLDDLSNVPSDETVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRN
QNSEETWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAY
LQLLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
LPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLIQKTYSDPDHCRVAAPIDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADAVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRK
GILRVFEMFQHTQLNKRMVYVFLERFLETLFPQNKFHELFNKLHSRSKQMQRYKQRLHTT
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagagaccagtctttccatatggggatggggaagtcttggtgttgtgcttttt
ctaataacttttggaccctttgctatattttactttgcattttatatcctctgcttcgtg
ggtgggggttttgtggttactcttttatttggaaaaagcaactcagaaaaatatcttgag
cagtgtgaacattcatttcttccctgtacatcagttgggatccctaagtgcatagaagaa
atgaaacgtgaagccagacctattaagattgacagaagactgacaggtgcaaatataatt
gatgagcctttgcaacaggtaatccagttttccctgagagactatgtgcagtattggtat
tacacactaagtgatgatgaatcgtttcttctggaaatcagacaggctcttcagtatgca
cttgttcagttttctgccaggtcaaaggaaacagactggcagccttatttcactacacga
cttgttgatgactttggcactcatcttcgagttttcagaaaagctcagcaaagaatagca
gagaagggtgatcagatgaaagaccaagctgaggaacttgtagatacattctttgaggtt
gaagttgaaatggaaaaagaagtctgtcgtgacctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctctcccgagggattcttctt
ccattaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataatata
ggagagttggaagcagtgaaagataaagcaagtgaagaactgcaatatcttcgatctcta
gatacagcgggagatgatatcaacactataaaaaatcaaataaacagtttattatatgtt
attaaagtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggaccatattctggtagac
aatgttgcactacaattttttatggattacatgcagcagactggtggccaagcacatctg
tttttctggatgacagtggaaggatacagggttacagcacagcaacagctggaggtactt
caaagccggcaaaaagatggcaagcatcaaactaatcaaaccaagggtctgttaagagca
gctgcagttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatatt
gatgacaacttagtagcaaaactggcagaaacactgaaccatgaggatccaacacctgaa
atctttgacgacattcaaagaaaggtttatgaattgatgctgcgagatgaaagattctac
ccttcattcaaacagaatgtattgtatgtgcgtatgttagctgagctggatatgctgaag
gatcctagtttcagaggatcagatgatggggaaggagaatcctttaatgggtctcctacc
ggcagcataaatctgtccttagatgacctttcgaatgtcccttctgatgagacagttcaa
ctccatgcatacatctcagatactgtctatgctgactatgacccatatgctgtggcaggc
gtgtgtaatgaccatggcaagacatacgcactgtatgctatcacagtccatcggcgaaat
caaaacagtgaagagacatggaagacatatcggcgttacagtgactttcacgactttcat
atgaggatcactgagcagtttgaaaatctggcaaatatactgaaacttcctggcaaaaag
acatttaacaatatggacagagaattcttggaaaagaggaaaaaagatttaaatgcatat
ttgcagctcctgttaaatcctgaaatgatgaaagcttctccagctctagcccattatgtg
tatgacttcctggagaataaagcctacagcaaagggaagggagattttgcacggaagatg
gacacatttgtaaacccactgcgtaactctatgagaaatgtatcaaatgcagtcaagtct
ctccctgacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtca
gagagattgggacaagacataaagcaatcatttttcaaggtgcctcctttgatccagaaa
acctattcagatcctgaccactgccgtgttgcagcaccaattgatgacaatgtggatgac
aatatcccacttagagtaatgctcctcctgatggatgaagtctttgatttaaaggaacgg
aatcagtggttaagaagaaatataaaaaatctgcttcaacagcttattagagcaacatat
ggtgacacaattaacaggaaaatagttgatcatgttgactggatgacatctcctgaacaa
gtagcagatgctgtaaaacgcttcagagatgctttttggcccaatggcattttagcagag
actgttccgcggagagacaaagctattagaatgagaacaagagtagcagggaagaccaaa
ttactggaggtaatgccagatgagctgaagcacatcataggcgctgagacaactcgaaaa
ggcattcttcgggtctttgaaatgttccagcacactcaactgaataagagaatggtgtat
gtctttctggagagattcttagaaaccttatttccacaaaataagttccatgagctcttc
aacaaactgcattcacggtcaaagcagatgcagaggtacaaacagagactacacactact
caagcgccttccttgcagaaaaggtga
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