Bucephala clangula (common goldeneye): 308445212
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Entry
308445212 CDS
T11949
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04519
Cadherin signaling
bcla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
308445212 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
308445212 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bcla04990
]
308445212 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
bcla04990
]
PDZ domain-containing proteins
MAGUK family proteins
308445212 (PALS1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
308445212
NCBI-ProteinID:
XP_080807344
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All DBs
Position
7:27860184..27910010
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AA seq
675 aa
AA seq
DB search
MTTSHMNGHITEDSDSETKNVDLASPEEPQKHREMAVDCPGDLGSRMMPMRRSAQLERIR
QQQEDMRRRREEEGKKQELDLTASMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYTVK
TLEVEELLTSLKHIQHILVDPQSQEDISLILQLVQNTDFQNAFKIHNAVTVHMNKASPPY
PLISNAQELAQEVQSVLKPSHHKDGQELNALLNAPHMQALLLAHDKVAEQEMQPEPVTDE
RIYENVGTYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFASAVPHTTRSRRETEVAGRDYHFISRQAFENDI
AAGKFIEYGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFVAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcatatgaatggacacatcacagaagattctgacagtgaaacaaaaaat
gtggatcttgcatctcctgaggaacctcagaagcaccgagaaatggctgttgattgcccg
ggggacttgggctccaggatgatgcccatgcggcggagcgctcagcttgagcgaatccgt
cagcagcaggaggacatgaggcgcaggcgggaagaagagggaaagaaacaagaactggac
ctcactgcttctatgaggcttaagaaattagcacaaattcctcctaaaactggaatagac
aatccaatatttgacacagaagaagggattgttttggagagtcctcattatactgtgaag
acactagaagtggaagaactgttaacttctcttaagcatatccagcacattttggtagac
cctcagagccaagaggatatctctctcattttacagcttgttcaaaatactgattttcag
aatgcatttaagatacacaatgcagttacagtgcatatgaacaaagccagccctccatat
cctctcatctccaatgcacaagaactagcacaagaggtacagagtgttttgaaacccagt
caccacaaggatgggcaggagcttaatgctttgctgaatgcccctcacatgcaggcactt
ctactggctcatgataaggttgcagaacaagaaatgcaaccggagcctgtgacagatgaa
agaatttatgagaacgttggcacatatggaggggagacagttaaaatagttcgtattgag
aaagcacgagatattccattgggtgctactgttcgtaatgaaatggattctgtcatcatc
agtcgaatagtcaaaggaggtgctgcagagaagagtgggctgttacatgaaggggatgaa
gttttggagattaatggcattgagattcgtggaaaagatgttaatgaagtttttgattta
ctggctgacatgcatggcactctgaccttcgtgttgattcccagtcaacagagcaaacca
cctcctgcgaaggagacagttatacatgtgaaagcacattttgactatgatccttctgat
gacccttatgtcccctgccgagagttaggcctgtcttttcaaaaaggagatatactccat
gtgatcagccaagaagatccaaactggtggcaggcttacagagatggagatgaagataac
caaccactggcaggccttattcctggaaaaagttttcagcaacaaagagaagcaatgaag
caaactatagaagaagacaaggagccagaaaaatcaggaaaactctggtgtgcaaagaaa
aacaaaaagaaacggaaaaaggttttatacaatgcaaataaaaatgatgattatgataac
gaagaaattttgacctatgaggaaatgtcactgtatcatcaaccagcaaataggaaacgg
cctattgttttgatcggtccacagaactgtggtcaaaatgaattgcggcagagacttatg
aataatgaagtggaccgctttgcctctgcggttccccataccactcggagcaggcgggag
actgaagtagctggcagagattaccatttcatttcccgacaagcatttgagaatgacata
gctgctgggaagtttattgaatatggagaatttgaaaagaacctctatggtactagcata
gactccgtgcggcaagtaatcaactccggcaagatatgccttttaaatcttcatacccag
tcattgaagacgctacggaattctgacctgaagccatatataatatttgttgcaccacct
tcacaagagagattgcgtgctttattggccaaagaagggaaaaacccaaagccagaagag
ctgagagaaatcatagagaagacgagggagatggaacaaaacaatggtcactatttcgac
acagcaattgtgaattctgatcttgacaaggcgtatcaagagttacttcggttaataaac
aaacttgacacagagccccagtgggtaccctctacctggctacgatga
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