Bucephala clangula (common goldeneye): 308445666
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Entry
308445666 CDS
T11949
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bcla Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcla03041
]
308445666 (DDX18)
03009 Ribosome biogenesis [BR:
bcla03009
]
308445666 (DDX18)
Enzymes [BR:
bcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
308445666 (DDX18)
Spliceosome [BR:
bcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
308445666 (DDX18)
Ribosome biogenesis [BR:
bcla03009
]
Eukaryotic type
90S particles
Helicases
308445666 (DDX18)
Pre-60S particles
308445666 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Sec_Non_Glob
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
308445666
NCBI-ProteinID:
XP_080808120
LinkDB
All DBs
Position
8:complement(30976526..30987850)
Genome browser
AA seq
644 aa
AA seq
DB search
MSVSVAAGNLPMRLLRKKIHKRNLKLRQRNLKLREAERAAPPAASLSPPEEEQEEEAAEE
APEAATPEAEAPEVCPEGAGVKRKKKKKKRKAAAAPENGTETKKAKTEEDKSVEAEDEDG
KDSGEKEVEEEEEEDEVPSLPLGLTGGFEDNSFTSLDGLVSENTLKGINDMGFTHMTEIQ
HKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRELAMQ
TYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKN
LQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEPLYV
GVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLN
YIDLPVMAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDP
KEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLE
KLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYNVNNLDLNKVSLSFGFKVPPFVDLNVN
SSQGRRLQKRGGGGGFGYQKSKNVHKAKIFKHINKKSDNRQFSR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtcggtggccgcgggcaacctgcccatgcggttgctccgcaagaagatccac
aagcgcaacctcaagctgcggcagcgcaacttgaagctgcgggaggccgagcgggcggcg
cctccggcggcctcgctgagccccccggaggaggaacaagaggaggaggcagcggaggaa
gcccccgaggcggcgacccccgaggcagaagcccccgaggtgtgcccggagggtgctggg
gtgaagaggaagaagaagaagaagaagaggaaggcggcggctgctcccgagaacggtaca
gaaactaaaaaagcaaaaactgaggaggacaagtctgtggaggcagaagatgaagatggg
aaggattctggagagaaagaagtggaagaggaggaggaagaagatgaagtacctagttta
ccgctaggtttaacaggtggttttgaagacaattcttttacatcccttgatggtcttgtc
agtgagaatacactgaaaggcataaatgacatgggctttacgcacatgacagaaattcag
cataaaagtattaaacctcttctggaaggcagggatattttagcagccgcaaaaacaggc
agtggcaaaacacttgcatttctcattcctgcagtagagctcatctacaagttaaaattc
atgcctagaaatggaacaggtgttatcattctttcacctactcgagagcttgcaatgcaa
acctatggagttcttaaagaacttatgaatcatcacgtgcacacctatggtctgataatg
gggggcagtaacagatcagcagaagcacagaaacttgggaatggaatcaacatcattgta
gcaacaccaggaagacttctggatcatatgcagaacactccaggtttcatgtacaagaac
ttgcagtgtttggtaattgatgaggcagatcgtatcttagaggttggatttgaagaagaa
atgaaacagatcataaaacttctaccaaagcgcagacagacaatgcttttttctgctaca
caaaccagaaaggttgaagatctggcaaagatctctctgaagaaagagccactgtatgtt
ggggttgatgataacaaggagacagcaacagttgatggtcttgaacagggttatgtggta
tgtccgtctgaaaaaagattccttttgctcttcacattccttaagaagaaccggaagaag
aaactaatggtatttttttcttcatgtatgtcagtgaagtaccactatgaattactcaac
tacattgatctgcctgttatggccattcatggcaagcagaaacagacgaaacgtaccacg
acatttttccagttctgtaatgcagaatctggaattctgttgtgcactgatgtagctgcc
agaggactggatattcctgaagtggactggattgtccagtatgaccctccagatgatcca
aaagagtatattcatcgtgttggtagaacggccagaggtataaatggtagaggacatgct
ctgctcattttacgaccggaagaactgggctttcttcgttacctgaaacaagccagggta
ccactcagtgaatttgaattttcgtggtcaaagatttcagatatccagtctcagctggag
aaactgattgagaagaactactttcttcacaagtcagcccaggaagcatacaaagcctac
attagagcttatgactcccattctctgaagcagatatataatgtcaataacctggatctt
aacaaagtcagcctttcatttggttttaaagtccctccatttgttgacctcaatgtgaac
agcagccaaggcagaaggctacagaagagaggtggaggtggaggatttggttaccagaaa
tcgaagaacgtccacaaagctaaaatcttcaagcatattaacaagaaatcagacaatcgg
cagttttctcgttaa
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