Bucephala clangula (common goldeneye): 308445897
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Entry
308445897 CDS
T11949
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
bcla Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bcla03037
]
308445897 (CFAP43)
Cilium and associated proteins [BR:
bcla03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
308445897 (CFAP43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
CFAP251_N
CFAP43_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
WD40_MABP1-WDR62_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40
Beta-prop_ACSF4
WD40_like
Motif
Other DBs
NCBI-GeneID:
308445897
NCBI-ProteinID:
XP_080808602
LinkDB
All DBs
Position
9:complement(<25946287..>25989671)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAAGEEEAPGGGCCPSPQEAALDVSWVQGFSKKNLGFINNQTVCYPCGNYILFLDIKTKK
TTALQCPTGQVGAFAVNANSKVLAFSDRKLNPLIYVYSFPELNKRTELKGNVQLDYTVLA
FSFTGPYLAGYSSIPEFVLSVWNWQDSILLCSESQPGVPVTSLSFNPMNWQQLCSANESS
VTVWHIERNYDEHHLKRNPVKLPHGHGSPNLHEDLFFPDSSDEDPYHGPVMPVSAIAGLV
GDEAETFMPRNDIKPLVHPTAHCWTATSDIYMGCKEGFILKIDAETLSACVLQQKPLPEH
MRKVSDVVAYVRREVWKKKGGKPRDLQRTVVFAMAFCNEGLYTAGNEGILFFYHIRDLQY
EMKICADIVEPISSLLFSPDYTILLLVTDQGTIYTYKPAHRGEAVKLLDASSSCFLAADF
LPPENKYCVSVTISGEVQVWLLEDGTSLSKTNLNIEATAMACCPSSNSVAVGTKRGQIYF
IDVTDVEAPRVVHIIFISTFPVLSLHYDQSGQFLITRATEEHIFILDARPSKLFQVLGYT
VLADEVLGLSVFSDFENNLVEVMVLLNVAEVQRARLEIFCLPSALTEDNEKFVNEQGMLN
ASAIKKEQYDLDYPLSSAVRLKDNTVYGYCTCARFICKYNLSEQNIMEDPPVLLSEKRTP
SNQFGSGFLCLSPNSRWLASAAKDGVLFIYHTSTMEILAQKHCHSYQGGGIRSTVFSLDG
KFILVNGETDGALVCLKWKKIKETEAKEAAFHWQSLLTVLNKSISNENAVLKCMAEWHFD
PESTSESLSEKESKEAPAQSSNVEVTEDENFTILPSDSTSEMTWLGQKIKKVMREETERF
SDQKKELQMGIKKLRKTIQKMLHENEQVPDIEKLEQQEFNLDTEEQKRVQAEAEQEVARV
REKIEMETLANCYLQNVIRNECWDSMSVKGRTVKCFHIACEVQNYPLKELNEEELATLEK
VLRLRKIEAADPKVQKRSLEAVSETEEGENAEEVMAGASTSCCLDGSLSSQYGGDTSVLY
HQLDLHSREQKVNQIVLLKDIIYKVKTAFNKEFDIVVRQKEQEIARVKERNLRIQEILAQ
LDLQVEVWEPGLTDDEMPEQVLTVQDSEIKAEKYLTPQERERAEMLAKLEMERRLIALDN
ERLRALNDMMGGVLEVQKEDILKIDIPPPPFISKPEHEWSDQEVIIFREYEEKVKELNEE
KEKRRRALENEWKKLEASIQETTHNFDETVCKLFERKVTLEMVIYQEELKIVNLIYSLLL
DEELDTREAGLRHFFMKKQKENVNVTGIIQNTKGKIEFYSDAYENAIAEDKNLESDFSKD
FADVPEDLLDELLQLYKCRPRTPVRKTLPHTANPYGNCSASSEDYKDILTCLMKAMDELD
NPKHMPDGLDPSIWEQFCQARRNKMESEQLVKWKALNLAEMQAFLQRRMDDDQKIKSDIE
YVSQELIWLQEKKMKFHLDLTFQFLLKQGQVELEITEIPDYTDAILINRSVVEELNCSIM
AQGEKKIASMVERKDFSRGIFLLEWEHKKMRMQIEDLKQKARDIAVLPISKDRQLFLTML
NYDSRIAHRISVMKQTLDVMDKLHKKNMKNRQKRIRELEKCITLKEQANYELSLQLKEML
VSVSERRHISRAADIQRVSERNAKQRYQEILKQKNLRDLVREQEEEFEILQAEAERLRSR
TFPIL
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgaggaggaggccccggggggcggctgctgcccctcgcctcaggaggcg
gcgctggacgtgagttgggttcagggattctcgaaaaagaacttgggctttatcaacaat
cagaccgtctgctacccttgtggcaattacatcctcttcctggacattaaaacaaagaag
acaacagcgctgcagtgtccgaccggccaggtgggagccttcgcagtgaacgccaacagc
aaagtgctggccttctcagatcggaagctgaatcccctcatatatgtctacagctttcca
gaactgaataaacggacagaattaaaaggtaatgttcagttggactacactgtacttgca
tttagtttcacaggcccttatctagccggttactcttcaatcccagaatttgttctttca
gtatggaactggcaagacagtatcctcctgtgcagtgagtcccagccaggcgtaccagtg
acctcgttaagttttaatcccatgaattggcaacaactgtgttctgctaatgagagctct
gttactgtctggcatattgaaaggaattatgatgagcatcaccttaagcgaaaccctgtg
aaactccctcatggacatgggtctccaaatcttcatgaagatttgtttttcccggattct
agtgatgaagatccctaccatggccctgttatgccggtttcagccattgccggattggta
ggagatgaagcagaaacattcatgcctagaaatgatattaagcctttggtgcatcctact
gcccactgctggactgcaacctctgacatttacatgggctgtaaagaaggatttattttg
aaaattgatgctgagacactcagtgcttgtgttcttcaacagaaacctctaccagaacac
atgcgtaaagtatcggacgtggtggcctatgttcgtagagaagtatggaaaaaaaaaggt
ggcaaaccaagggatctacaaagaacagttgtatttgccatggcattttgtaacgaggga
ctgtacacagctggaaacgagggcattttattcttttatcacatcagagatcttcagtat
gagatgaaaatctgcgctgacattgtagagcctatatccagcctcctgttctctcctgat
tacacaatccttctgcttgttactgatcaggggacaatctatacttacaaacctgcccac
agaggagaagctgtcaaactcttggatgcaagcagcagttgttttctggcggctgatttt
cttcctccagagaacaaatactgtgtgtctgtaacaatttcaggtgaagtacaagtttgg
ctcctggaagatgggacttctcttagcaagacaaaccttaatattgaggcaactgctatg
gcttgctgtccctcctcaaacagtgttgctgtagggaccaaaagaggtcaaatatacttc
attgatgttaccgacgttgaagctccacgggttgttcacataatttttatttccacattt
ccagtactatctttgcattatgaccagagcggccagttcctcatcactagagctacagaa
gaacatatctttattctagatgcccggccttcaaaattattccaggttcttggatataca
gtgttggcagatgaagtgctgggtctctctgtattttctgacttcgagaacaacttagtt
gaagtaatggtacttcttaatgtagcagaggtccagcgagcgaggctggaaatcttttgt
ctgccttcagcactcaccgaagataatgaaaagtttgttaatgaacaaggaatgctaaat
gctagtgccattaaaaaggagcaatatgatctggattacccgttgagctcggcggtcaga
ctgaaggataacacagtgtatggctactgtacctgtgcacgtttcatctgtaaatacaat
ctctctgaacagaatattatggaagatccaccagtattgttatcagaaaagaggactcct
agcaatcagtttggatcaggattcctctgcttatcacccaacagccgatggctagcatca
gcagcaaaagatggtgttttgttcatctatcacacttctactatggaaatacttgctcaa
aagcattgccactcatatcaaggagggggaatcagatccacagtattttcactggatggc
aaattcatcctcgttaatggtgaaaccgatggtgccctggtgtgtctgaaatggaagaaa
ataaaggaaactgaagctaaggaagctgcttttcattggcaatctcttcttactgtactg
aacaagtctatttcaaatgaaaatgctgtgttaaaatgtatggcagaatggcactttgac
ccagaatccacatcggaatcactttcagaaaaggaatctaaggaggcaccagctcagtcg
tctaatgtagaggtgacagaagatgaaaacttcaccattttgccttcagacagcaccagt
gaaatgacctggctgggtcagaaaataaagaaggtcatgagagaagagactgagaggttt
tctgaccagaagaaagaacttcaaatgggaattaagaagctgcgtaaaactattcagaaa
atgctgcatgaaaatgaacaggtgccagacattgagaaactggagcaacaggagttcaac
ctggatacagaagaacagaaaagagtgcaagcagaggctgaacaagaagtggccagggtg
agggaaaagatcgagatggagactttagccaactgctacttgcagaatgtcatcagaaat
gagtgctgggactccatgtctgtaaaaggacgtacagttaagtgtttccatatagcttgt
gaagtgcagaattatcccctgaaagaacttaatgaagaagagctggcaactctggagaaa
gttctccggttaaggaagatcgaggcagctgatcctaaggttcagaagagaagtcttgag
gctgtgtcagagacagaagaaggagagaatgcagaagaagtaatggctggtgctagcaca
tcttgctgcctggacggaagtctgagttctcagtatggtggagacacatctgtgctttac
caccaattggacttgcactctagggagcagaaagtcaatcaaatagtattactgaaggac
atcatttacaaagtgaaaactgcttttaataaggaatttgacatagttgtacgacaaaag
gagcaggagatagcaagagtgaaagaaagaaacctgaggatccaagaaatcttggctcaa
cttgacctccaagtggaagtgtgggagccaggtcttacagatgatgagatgccagagcaa
gtactcactgttcaggattcagagattaaagctgaaaagtacttgactccgcaagagaga
gagagagcagaaatgctggctaagcttgaaatggaaagacgccttattgctctggacaat
gaaagactacgtgctcttaatgacatgatgggtggagtgctagaagtccaaaaggaagac
atattgaaaattgatattcctccacctccttttatatccaagcctgaacatgaatggagt
gatcaagaagttataatattcagagaatatgaggaaaaagtgaaggagttgaatgaagaa
aaagaaaagcgtagaagggcactggaaaatgaatggaagaaacttgaagcttccatacag
gaaacaacacacaattttgatgagactgtatgcaagctctttgaaagaaaagtgacttta
gagatggtcatctatcaggaagaactcaaaatagtcaatcttatttattctttactgttg
gatgaagagttggacactagagaagctggacttcggcatttctttatgaagaagcagaaa
gagaatgtcaacgttacaggaataatccagaatacaaaagggaaaattgagttttacagt
gatgcatacgaaaacgcaatagctgaagataagaatctggaaagtgattttagtaaggac
tttgctgacgttcctgaagatcttcttgatgaacttctccaactttacaaatgtcgacca
aggaccccagtgagaaaaacgctccctcacaccgctaacccatatgggaattgttcagcc
tcatctgaagattacaaagatatactcacctgtttaatgaaagccatggatgagctggat
aatcctaaacacatgcctgatggtttagacccatctatatgggaacagttttgtcaagct
agacgaaataaaatggagagtgagcaactggtgaagtggaaagccctaaatctggcagag
atgcaggcctttctccagagaagaatggatgacgatcagaagattaagtcagacatagaa
tacgtttcccaagaactcatttggctgcaggagaagaagatgaaatttcatttggatttg
actttccagtttttgttaaaacaaggacaggtggaattggaaattactgagatcccagat
tacaccgatgccattctcattaataggagtgttgttgaagaactaaattgcagtatcatg
gctcaaggagaaaaaaagattgctagcatggtggagcgtaaagacttctctagagggata
tttctgttggaatgggaacataagaaaatgagaatgcaaatagaagatctgaaacagaag
gctcgggatattgcagtgctacctatttcaaaagatcgccagctattccttaccatgctg
aactatgacagtcgcattgcccaccgcatttcagtgatgaagcagactcttgatgtcatg
gataagctgcacaagaagaatatgaagaaccgtcagaaaagaattagagagttggagaag
tgcatcactttaaaagagcaggcaaactatgaactcagccttcagctaaaggaaatgctt
gtgtctgtttcagaaaggaggcatatctctcgggcagctgacatacagcgtgtttctgaa
aggaacgcaaagcagcgttaccaagagattttgaagcagaaaaacctgcgggatctcgta
agggaacaagaagaagagtttgaaattcttcaggcagaagctgaaagactgagatcaaga
acattccctattctttaa
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integrated database retrieval system
