Bucephala clangula (common goldeneye): 308447961
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Entry
308447961 CDS
T11949
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
bcla Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bcla04040
]
308447961 (TRPM1)
Ion channels [BR:
bcla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
308447961 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRPM2
TRPM_tetra
Ion_trans
YVC1_C
LSDAT_euk
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
308447961
NCBI-ProteinID:
XP_080812312
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All DBs
Position
13:<16442241..>16473420
Genome browser
AA seq
1287 aa
AA seq
DB search
MRCPVFLSNNDDEINVFAWVISESLRDQLLVTIQKTFNYSRNQAHQLFVILMECMKKKEL
ITVFRMGSEGQQDIEMSILTALLKGTNASAPDQLSLALAWNRVDIARSQIFVFGHHWPVN
SLEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPRLEELYNTRLGPPNTLHLLVRDVKK
GNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKSFRTLYNNLFGPKRPKALKLLGMEDDE
PPTKGKKKKKKKEEEIDIDVDDPEVSRFQYPFHELMIWAVLMKRQKMALFLWQRGEETMA
KALVACKLYKSMAHESSESELVDDISQDLDNNSKDFGQLAVELLDQSYKHDEQIAMKLLT
YELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNPGLKVIMGILFPPT
ILFLEFRSYDDYSYQTSRENEEGKEKEDENVVSTGAYQEVLTLQECSVFEVLCADANADT
GSRKGDEENGNKKQNSLPIGTKIYEFYNAPIVKFWFYTISYLGYLMLFNYIILVRMERWP
SVQEWIVISYIVTLALEKVREILMSEPGKLSQKVKVWLQEYWNITDLVAISVFMIGAILR
LQNQPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVL
MSFGVARQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQIDPPCGDNLYDEDGKRLPP
CIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHDR
PVLPPPMIIFSHLYIIIKRVCCRCKKREGDQDERDRGLKLFLNDEELKKLYEFEEQCVEE
YFQEKEDEQQSSNDERIRVTSERVENMSMRLEEVNEREHFMKASLQTVDLRLSQLEELSG
RMVNALEKLAGIDKSELTYTRSRASSECDAAYLLRQSSVNSSDGYSMYRYHVGGDELTYD
DSTTPMSPAIGLRKKAHSIGTKEDGADPRMLVPENQTSLHYTSNANAVNPSDYSRSTLDI
EQNVSRPHSGSSILEDENQGIFKNDETVPRSINQMDVISRQSVPKPDFQNTQLKVERTKL
EATISYPLDKSKAMRYFPPETFSACQTTMMKSRSFIFAKGGKVVGGVNNWTTEYSTIMDK
VCPSTIEQWATEWKYEVQQQLSQEHPPEYPGFVSEAERHAEQKQLQMDTDDDSDVGEAGI
SASYTSAPATVKAQNENLLSVKPDRTSGFPSVRSKSLHSHSRKAKSVKDKLNRPGHASSV
TNLVVAFGSATEEQKARQENASTETEC
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgtccagttttcctttccaataatgatgatgagataaatgtgttcgcctgggta
ataagtgaatccctcagggaccagctactagttacaatccagaaaaccttcaactacagc
aggaatcaagctcatcagctgttcgtcattcttatggaatgcatgaaaaaaaaggaactt
atcactgtgttccgtatggggtctgaagggcaacaggacattgagatgtctatcttaact
gctctcctcaaaggtaccaatgcatctgctccagaccagctcagcttggctttggcctgg
aatcgcgttgacattgcacgcagccaaatctttgtcttcggacaccactggccagtgaat
tctctggagcaggctatgctggatgcactggttctggatcgagtggacttcgtgaaactg
ctcattgagaatggagtgaacatgcaacacttcctcactattcctcgactggaagaactt
tataatactagattgggccctccaaatacgctgcatttgctagttagagatgtgaaaaag
ggaaatcttccaccagattatcatatcagcctaatagatattggtcttgtacttgaatat
ctcatgggtggagcttatcgctgcaactatactcgaaaaagttttcggactctttataat
aatttatttggaccaaaaaggccgaaagctcttaaactactagggatggaggatgatgag
cctcccacaaaagggaagaagaagaagaagaaaaaggaggaagagatcgatattgatgtg
gatgacccagaagtcagccgctttcagtatccatttcatgaacttatgatatgggccgtg
ctgatgaaacggcaaaagatggcactcttcctttggcaacgaggagaggaaaccatggcc
aaggcacttgttgcctgtaagctctacaaatctatggcccatgagtcttctgagagtgaa
ctagtggatgacatctctcaggatctggacaacaactcaaaagattttggccaactggca
gttgagctcttggatcagtcctacaaacatgatgagcagattgccatgaaactgctgacc
tatgaactgaaaaattggagtaattctacctgcttgaaattggctgtggcagctaaacac
agggacttcattgctcacacatgcagtcagatgctcttaacagatatgtggatggggcga
ctacgtatgcggaaaaacccaggtcttaaggttataatggggattctcttccctcctacc
atccttttcctagagtttcgcagttacgatgattattcttaccagacatcaagagaaaat
gaagaaggcaaagaaaaagaggatgaaaatgtggtcagtactggagcttatcaggaagtt
ctaacacttcaagagtgctcagtattcgaagttctctgtgctgatgcaaatgcggataca
ggctcccgaaaaggcgatgaagagaatggaaataaaaaacaaaacagccttccaattgga
acaaagatctatgagttctataatgcacctattgtcaaattttggttctacacaatatca
tacctgggttacttgatgctatttaattatatcatcttggtgcggatggaacggtggccg
tcagtccaggaatggattgtcatctcctacattgtgacactggctttagagaaagtaaga
gagattctgatgtcagagccaggaaagctgagccaaaaagtgaaagtgtggctccaggaa
tactggaatattactgacctggtggccatttcagtatttatgataggagcaattcttcgc
ctacagaaccagccttacatgggttatggaagagtgatttactgtgtagatataattttc
tggtacattagagtactagatatctttggtgtgaacaagtatctgggaccttacgtcatg
atgattggaaagatgatgattgacatgctctactttgtggtgatcatgcttgtggttctc
atgagttttggagtagcccgccaagctatcctgcatccagatgaagagccttcttggaga
ctagctcgcaacatcttctatatgccctactggatgatctatggagaggtgttcgcagac
cagatagaccctccttgtggagacaatctttacgatgaggatggtaaacgcctccctcca
tgcataccaggggcctggctcactccagctattatggcctgttacctcttggtggcaaat
atcctcctggtaaacctgctgattgctgtcttcaacaataccttctttgaggtaaaatca
atatccaaccaagtctggaagttccagcggtaccagctgattatgacattccatgacaga
cctgtcctcccaccgccgatgattatcttcagccacctctacataatcattaagagagtc
tgctgtcgctgcaagaagcgtgaaggagaccaggatgagcgtgacaggggactgaagtta
tttctgaatgatgaagagctaaaaaaactgtatgagtttgaagagcagtgcgtagaagaa
tacttccaggaaaaagaggatgagcagcagtcatctaatgatgaacgcatcagagttacc
tctgaaagagttgaaaacatgtctatgaggctagaagaagtgaatgaaagagaacatttt
atgaaagcctctcttcaaacagttgaccttcgactctctcaactggaagaactctctggt
cggatggtgaatgctctggagaagctggcaggtattgacaagtctgagctgacgtatacg
cgttcacgggcttcatctgagtgtgatgctgcgtatctcctgaggcaaagcagtgtcaac
agctctgatggctacagcatgtatagatatcacgttggtggggatgagttaacttatgat
gacagtaccactccgatgtcaccagccataggattgcgtaaaaaagcccattccattggt
acaaaagaagatggagcagacccaaggatgctggttccagagaaccagaccagtctccat
tacacctctaatgctaatgcagtcaacccatcagattacagtagatctacattagatatt
gaacaaaatgtttccagaccccattctggttcgagtattttggaggatgaaaaccaaggg
attttcaagaatgatgaaacggttcctcgaagtataaaccagatggatgttatcagcaga
cagtcggtacccaaaccagattttcagaacacccagttaaaagtagaacggactaagtta
gaagcaacaatctcttatcccttagacaaatcaaaagcaatgcgctattttcctcctgaa
acgttcagtgcttgtcaaaccactatgatgaagtcgaggagctttatatttgcaaaaggt
ggaaaggtggttggaggagttaacaactggacgactgagtatagtaccatcatggataag
gtgtgcccttctacaattgagcagtgggccacagagtggaaatacgaagttcagcagcaa
ctttctcaagaacatcctccagagtaccctggttttgtctctgaagcagaaaggcacgca
gagcagaaacagttacagatggacacggatgatgacagtgatgttggtgaagcaggtatt
agtgcctcttacacgtctgcacctgccactgtcaaggctcagaacgagaacttactatca
gtaaagccagacaggacttcggggttcccatcagtacggtccaagagtttgcacagccat
tctcggaaagccaagtctgtaaaggacaaattaaacagaccaggacatgccagtagcgta
actaacttagtggtagcatttggcagtgcaacggaagaacagaaagctaggcaagaaaat
gcatccacagaaactgagtgttga
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