Bucephala clangula (common goldeneye): 308448186
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Entry
308448186 CDS
T11949
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
308448186 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcla03019
]
308448186 (MYO5A)
04131 Membrane trafficking [BR:
bcla04131
]
308448186 (MYO5A)
03029 Mitochondrial biogenesis [BR:
bcla03029
]
308448186 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bcla04812
]
308448186 (MYO5A)
Messenger RNA biogenesis [BR:
bcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
308448186 (MYO5A)
mRNA cycle factors
P-body specific factors
308448186 (MYO5A)
Membrane trafficking [BR:
bcla04131
]
Others
Actin-binding proteins
Myosins
308448186 (MYO5A)
Mitochondrial biogenesis [BR:
bcla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
308448186 (MYO5A)
Cytoskeleton proteins [BR:
bcla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
308448186 (MYO5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
AAA_22
Myosin_N
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
308448186
NCBI-ProteinID:
XP_080812744
LinkDB
All DBs
Position
13:19820680..19922285
Genome browser
AA seq
1878 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGVD
DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCTIPPKHDPLTIF
CDLMGVEYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN
KALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEK
PRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKFKLLPELFQDEEKVLS
PTSATPSGRVPLSRTAVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQRDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW
LMRKKYVRMRKAAITIQRYVRGYQARCYAKFLRRTRAAITIQKFQRMYVVRKRYQCMRDA
TIALQALLRGYMARNKYQMMLREHKSIIIQKHVRGWLARVRYRRTLKAIVYLQCCYRRMM
AKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKLNSLEITYSTE
TERLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQSEKKTIEEWADKYKHET
EQLVSELKDQNTLLKTEKEELNRRIHDQAKEITEAMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKDELNLMASIPKPGHKRTDSTHSSNESEYTFSSEITEAEDLPLRM
EQEPSEKKAPLDMSLFLKLQKRVTELEQEKQSLQDELDRKEEQALRAKAKEEERPPIRGA
ELEYESLKRQELESENKKLKNELNELQKALTETRSPEVTAPGAPAYRVLLDQLTSVSEEL
EVRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRQS
PQDYHMLNEDGELWLVYEGLKQANRLLESQLQSQKKSHENELESLRGEIQSLKEENNRQQ
QLLAQNLQLPPEARIEASLQHEITRLTNENLFYEELYADDPKKYQSYRISLYKRMIDLME
QLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGML
EYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTI
NGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEHCLTNFDLAE
YRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEG
TYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKDMCSWSKGM
QIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTTA
QIVKVLNLYTPVNEFEERVLVSFIRTIQLRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLA
LETIQIPASLGLGFISRV
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgagctgtacacgaagtatgccagggtttggatccctgatccagaggaa
gtctggaagtcagcagaacttctcaaagattataaacctggagataaagttcttcagctt
cgacttgaagagggcaaggacctagaatattgccttgatccgaagaccaaggaactccca
cccttgcgaaaccctgacatacttgttggtgaaaatgacctcacagcactcagttatctc
catgaacctgctgttttacacaacctcaaagttcgatttatagactctaagctcatttat
acttattgtggtatcgtcttagtggccataaatccttatgaacaactgcctatctatggc
gaagatatcatcaatgcgtacagcggccaaaatatgggggatatggatccacacatcttt
gcagtggcagaagaggcatataaacagatggccagagatgagcgaaatcagtcaatcatt
gtaagtggagaatctggggcagggaagacagtctctgccaagtatgccatgaggtacttt
gccacggtcagtggatctgccagtgaagccaatgttgaggagaaagttttggcttccaac
cccataatggagtcaattggaaatgccaaaacaacaaggaatgacaacagcagtcgcttt
gggaaatacattgaaattggttttgataagagataccgaatcattggtgctaacatgaga
acttacctcctggagaagtcaagagtggtatttcaggcagaagaggagagaaattaccac
atcttttaccaactatgtgcctctgcagcattacctgaatttaaaactctacgcttaggg
aatgcaaattactttcactatacaaagcaaggtggaagccctgtgattgatggtgttgat
gatgctaaggaaatggtaaacaccaggcaggcctgcactttgctagggattagtgattcc
taccagatgggaatttttcgaatcctcgctggcatccttcacttgggcaatgtggagttt
gcatctcgggattctgacagctgcaccattcctcccaaacatgatcccctcaccatcttc
tgtgacctcatgggtgtggagtatgaagagatggcccactggctttgccacaggaagctt
gcaactgccactgaaacctacatcaagccaatttctaaactccatgccatcaatgccaga
gatgcacttgccaaacatatctatgctaatctttttaactggattgtagatcatgtgaac
aaagcccttcattctactgtaaaacagcattctttcattggagtgttggacatttatgga
tttgagacatttgaaatcaacagctttgaacagttttgtatcaactatgccaatgaaaaa
ctgcagcaacagttcaatatgcatgtctttaagttggaacaagaagaatatatgaaggaa
caaataccatggaccttgattgatttctacgacaatcagccttgcatcaacctcatagag
gctaaaatgggaattctggatctgttagatgaggagtgcaagatgccaaaaggctcggat
gacacttgggcccaaaagctatacaatactcatttgaataaatgtgccctctttgaaaaa
ccacgtttatcaaataaggctttcatcatcaagcactttgctgacaaggtggaatatcaa
tgtgaaggctttctagaaaagaataaagacacagtttatgaagaacaaattaaggtcctc
aaatcaagtaagtttaagctgctaccagagttattccaggatgaggagaaggtgctcagt
cccacgtcagcaaccccttcaggccgtgtgccattgtctcgaactgctgtaaaaccagcc
aaggccaggccagggcaaaccagcaaggaacataagaaaactgtggggcatcagttccga
aactctcttcatctgctgatggaaaccctgaacgctacaactccacactacgtgcgctgt
attaaacctaatgacttcaagtttccattcacatttgatgaaaagcgggcagtgcagcag
ctgagagcttgtggtgtcctggagaccatccgaatcagtgcagctggctttccctcaagg
tggacataccaagagttcttcagccgttaccgtgttctgatgaagcagagagacgtcctt
ggtgatcgaaagcagacatgtaaaaatgtcctggagaagctaattctggacaaggataag
taccagtttggtaagacaaaaatattttttcgggctggtcaagtagcctacctggaaaaa
ataagggcagataagttgagagctgcttgtatccgcatccaaaagacaatccgaggctgg
ctgatgagaaagaagtacgtgcgtatgaggaaggctgccatcaccattcagagatatgtc
agagggtatcaagcacgatgctatgccaagttcctacggagaacacgggccgccatcact
attcagaagttccagcgtatgtatgtggtccggaaaagataccaatgcatgcgagatgct
accattgctcttcaggctctcttaagaggttacatggccaggaacaagtaccaaatgatg
cttcgagagcacaagtctattattattcagaaacatgtaagaggctggctggctcgtgtg
cgctaccgtaggaccttgaaggcaattgtttacttgcaatgctgttaccggcgcatgatg
gcaaagagagagctaaagaaactgaagatagaagctcgttctgtggaacgctacaagaaa
cttcacattggcttggagaacaagatcatgcagctgcagcgaaaaattgatgagcagaac
aaagagtacaaatctctgctggagaaactgaacagcctggagattacatacagtacggag
acagagagacttcggagtgacgtggagaggcttcggatgagcgaggaagaggctaagaat
gcaaccaaccgtgttctcagccttcaggaggagatcgctaagctccggaaggagctgcac
cagactcagtctgagaagaagaccattgaggaatgggcagacaaatacaaacatgaaact
gagcagctggtatcggaactgaaagatcagaatacattactgaaaacagaaaaggaggag
ctgaaccgccgcatccacgaccaggcaaaagagataacagaggcaatggaaaagaagcta
gtggaggaaacgaaacagctggagctagatctgaatgatgaaaggttacggtatcagaac
ctgctaaatgagttcagccgcttagaggagcggtatgatgatctcaaggatgaattgaac
ttaatggcgagcatccccaagcctggacacaaaagaacggattcgactcacagtagcaat
gaatctgaatatacttttagctctgagatcacagaagcagaagacttaccactgaggatg
gagcaggaaccaagtgagaaaaaggcaccattggacatgtctctgttcctcaagctgcag
aaacgggttacagagctggagcaagaaaagcaatccctgcaagatgaactggacagaaag
gaagaacaagctcttcgtgctaaagctaaggaggaggaaaggcctccaataagaggtgcg
gagttggagtatgagtcactcaagcgtcaagaacttgaatctgagaataaaaaactgaag
aatgagttgaatgagctacagaaggccctcacagaaacacgatctccagaggtaactgct
cctggtgccccagcatatagagtcctcctggatcagctaacttcagtaagtgaggaactt
gaagtacgcaaggaagaagtcctcatcctgaggtctcagctggtcagccagaaagaggcg
attcaacccaagaatactatgacagattctacaatcctcttggaagatgtacagaagatg
aaagacaaaggagaaatagcacaggcatatattggattgaaggaaacaaacaggcaatct
ccccaggactatcatatgctgaatgaggacggagaactttggctggtttatgaagggtta
aaacaagccaacaggctgctggagtctcagcttcagtcacagaagaagagccacgagaat
gaactggaatcactgagaggagagatccaaagtctgaaagaagaaaacaatcgccagcag
cagctcttggcacagaatctgcagctgcccccagaggcccggattgaagccagcctgcag
catgagatcacccggttgacaaacgaaaacttgttttatgaggaattgtatgcagatgat
cccaagaagtatcaatcgtaccggatttcactttacaaacggatgattgatttaatggag
caacttgaaaagcaagacaaaactgttcgaaagttaaagaaacagttgaaagtatttgct
aagaagatcggtgaacttgaagtggggcagatggagaacatatcacctggacaaatcatt
gacgaacctattcgtccagtcaacattccaaggaaagaaaaggacttccaggggatgtta
gaatataagaaggaagatgaacaaaaactggtcaagaatcttattttagagctgaaacca
cgtggggtagctgtcaacctgattccaggactacctgcatatattttgttcatgtgtgta
cgccacgcagattaccttaatgatgaccaaaaagtgcggtccttgttgacttccactatc
aatggcatcaaaaaagtgttgaagaaaagaggtgatgacttcgaaacagtgtcattctgg
ctatccaacacctgccgatttttgcactgtttgaaacaatatagtggagaagaggggttt
atgaagcataatacacctcgtcagaatgagcactgcctcactaattttgacttagctgaa
tatagacaagtactgagtgacttggctattcagatctaccaacaacttgtccgagtgttg
gaaaacattctgcaaccaatgattgtttcaggaatgctggagcatgagactatccagggt
gtctcaggggtgaaaccaacagggctgcggaagaggacatccagcattgctgatgaagga
acctacactttggactccattattcggcagctgaattctttccattctgtgatgtgtcag
catggaatggatccagagctcatcaaacaggttgtcaagcagatgttctacatcattggg
gctgtaacacttaacaatcttcttctgcgcaaggacatgtgctcatggagcaaaggaatg
cagataagatacaatgtgagtcaacttgaagaatggctacgtgataaaaatttgatgaat
agtggggctaaagaaacactggagcccctcattcaggctgcacagttgttgcaagtaaaa
aagaaaacagatgaagatgcagaagccatttgttcaatgtgcaacgcattgactactgcc
cagattgtaaaagtactgaatttgtatactccagttaatgaatttgaagagagagtcttg
gtatcatttatccgtacaatacagctgcgtcttcgagacaggaaggactctcctcaattg
ctcatggatgctaaacacatctttcctgttacttttccatttaatccatcctctctggca
ttagaaacaatccagatcccagccagcttggggctgggcttcatatcacgtgtctga
DBGET
integrated database retrieval system
