Bucephala clangula (common goldeneye): 308448275
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Entry
308448275 CDS
T11949
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform 1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
bcla
Bucephala clangula (common goldeneye)
Pathway
bcla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
308448275 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bcla03036
]
308448275 (SIN3A)
Chromosome and associated proteins [BR:
bcla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
308448275 (SIN3A)
REST complex
308448275 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
308448275 (SIN3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
308448275
NCBI-ProteinID:
XP_080812954
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All DBs
Position
13:complement(12991835..13019595)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFQHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHSTPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPQHQSQPSAQSTPTPAQ
PAPQPPPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
NQNGCQIRRHSGTGTTPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLH
QILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENSNGATGGLLASQSSRTLLEATYQRRAEQLMSEENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVTREMAAETSKWLMGEGLEGLVPCTTSCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcggttggacgagcaggagtcacccgtgtacgcgtcgcagcagagacgtatc
accagcagcaccgaggctttccagcaccagcaccgcgtgctcgccccggccccgccggtg
tatgaggcggtttcggagaccatgcagtctgccacggggatccagtactccgtgaccccc
agctaccaggtgtcggctgtgccgcagagctcgggcagccacgggccggccatcgcggcg
gtgcacagcgggcaccaccacagcacgccggtgcagccgcacggcagccaggtggtgcaa
agccacactcacccgacgccgccggccgtgcctgtgcaggggcagcagcagttccagagg
ctcaaggtggaggatgcattgtcttaccttgaccaggtgaagctgcagtttggtagccag
ccacaggtctacaatgacttcttggatattatgaaggaattcaaatctcaaagcattgac
actccgggagtgatcagccgtgtatcacagctcttcaagggccacccagacttgatcatg
ggcttcaacaccttcttgccacctggttacaagattgaggtgcagacgaacgatatggtg
aacgtgacgacaccggggcaggttcaccagatccccactcacggcttgcagccccagccg
cagccccagccgcagcatcagtcgcagccttcagcgcaatcaaccccaacaccagcacag
cccgcgccgcagccaccgcctgccaaaatcagtaagccatcccaactgcaggcgcatacc
cctgccagccagcagactcccccgattccaccgtatgcatcgccacgctcgccgccggtc
caacctcatacacctgtgacaatctctctgggaaccacaccatccctgcagaacaatcag
cccgttgagtttaatcacgccatcaactatgtcaacaagatcaagaatcggttccaggga
cagccagacatctacaaagccttcctggagatcctccacacctaccagaaggagcagcgg
aacgccaaggaggcaggaggcaactacacgcccgctctgacggagcaggaggtgtacgcg
caggtggctcgcctcttcaaaaaccaggaggatctgctctcagagttcgggcagttcctg
cctgatgccaacagctctgtgctgttaagtaagacaactgcagagaaagtggaatcagtg
agaaacgatcacggtggcaccgtgaagaagccccagctcaacaacaagcagcagagaccc
aaccagaacggctgtcagatccgacggcactcaggaactggaacaacccctccggtcaag
aagaagccgaagctgcttggtttaaaagaccagtctttggcagaagccagcaagcatggc
gtggggacagaatctctgttctttgagaaggtccgcaaagctctgcgcagcacagaagca
tacgaaaacttcctccgctgcctggtgattttcaaccaggaggtgatctcccgggcagag
cttgtgcagctcgtctctccctttctggggaaattcccagagttgttcacttggtttaaa
aactttttggggtataaagagtctgttcacatggagacgtatccgaaggaacgggccacg
gaggggattgccatggagatagactatgcctcctgcaaaagactgggctccagctaccgc
gccttgcccaagagctaccagcaacccaagtgcacggggcggacgccgctgtgtaaagag
gttttgaatgacacctgggtctccttcccttcctggtctgaagactccacgtttgtgagc
tccaagaagacacaatacgaagagcacatctacaggtgtgaggatgagcgctttgagctg
gatgttgtcttggagaccaacctggcaacaatccgcgtccttgaggcaatccagaagaag
ctgtcacgcttgtcggctgaggagcaggccaaattccgactggacaacaccctgggcggc
acctcggaggtgatccaccgcaaggctctccagaggatatatgctgacaaagcagccgac
atcatcgatgggcttcggaagaacccctctgttgctgttcccatcgtgctgaaaaggtta
aagatgaaagaggaagagtggcgagaagcccagcgagggtttaataaagtctggcgggag
cagaacgagaaatattacctgaaatccttggaccaccagggcatcaacttcaagcagaac
gataccaaggtcctgaggtcaaagagtctcctcaatgagattgaaagcatctatgatgag
aggcaagagcaggcctcggaagacaacgccggcgtacccacaggcccgcacctatcgtta
gcctacgaagacaagcagatcctggaggacgccgcctcgctcatcatccaccacgtgaag
cggcagacaggaatccagaaagaggacaagtacaaaatcaagcagattatgtaccacttc
attccagacctgctattcgctcagcgaggtgaactctccgatgtggaagaggaggaagag
gaagaaatggacgtggacgaagctactggagctgcgaaaaagcacaacggtgttgggggc
agccctcccaaaaccaagctgatgttcaacaacacaacagcccagaagctgcggggcatg
gatgaggtctacaacctcttctacgtgaacagcaactggtacattttcatgcggctgcat
cagatcctgtgcttgcggctgctgaggatctgcacccaggccgagcggcagatcgaagag
gagacgcgggaaagggagtgggagagggaagtgctgggcataaagcgagacaagagcgac
agccctgccatccagctgcggctgaaggagcccatggacatcgacgtggaggattactac
ccggccttcctggacatggtgcgcaatctgctggacgggaacatggactcgtcgcagtac
gaggactccctgcgcgagatgttcaccatccacgcctacatcgccttcaccatggacaag
ctgattcagagcatcgttcgacagctccagcacatagtgagcgacgagatctgtgtgcag
gtcacggacctctacctgtcggagaacagcaacggagccacgggaggccttctcgcctca
cagtcctctcgtacccttctggaggccacctaccagcgcagagctgagcagctcatgtca
gaggagaactgcttcaagctgatgttcattcagagcagaggccaagttcagttaaccatt
gagctgctggacacggaagaggagaactcggatgacccagtagaagcagagcgctggtcg
gactacgtggagcggtacgtcaactccgattctacctcccccgagctccgggagcacctg
gcccagaaacccgtcttcctgccgaggaatctgaggcggatccgtaagtgtcagcgtggt
cgggagcagcaggagaaggaagggaaggagggaaacagtaagaagtccatggagaacgtg
gagagcttggacaagctggagtgtaaattcaaactgaactcctataagatggtgtacgtg
atcaaatcggaggattacatgtacaggaggactgctctgctgcgagctcagcagtcccac
gaacgagtgagcaagcggctgcaccagcggttccaggcctgggtggataaatggaccaag
gagcacgtcacccgcgagatggcagccgagacgagcaagtggctcatgggcgaagggttg
gagggcttggtgccctgcaccacctcctgtgacacagagaccctgcactttgtgagcatt
aacaagtaccgtgtcaaatatggcacgatattcaagacaccataa
DBGET
integrated database retrieval system
