Bucephala clangula (common goldeneye): 308449003
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Entry
308449003 CDS
T11949
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform 1
KO
K10779
transcriptional regulator ATRX
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
308449003 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcla03000
]
308449003 (ATRX)
03036 Chromosome and associated proteins [BR:
bcla03036
]
308449003 (ATRX)
Transcription factors [BR:
bcla03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
308449003 (ATRX)
Chromosome and associated proteins [BR:
bcla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
308449003 (ATRX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
308449003
NCBI-ProteinID:
XP_080814181
LinkDB
All DBs
Position
15:complement(17783180..17868533)
Genome browser
AA seq
2425 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKTIGKSREPESSPTSMENN
REEGSSSSERMKSLGSSRSKRKPTIVTKYVGSDDEQILDETVNEDNSNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKAK
VESEKSKIYDHTVKFSPKRNNSNCNGEEKKLDDSYSGSLTYSYKALMVPKDMLKKTKKLV
ETTANMNSSFVSFLKKAAENLEISPAVQLRQLKAFKSVLGDIKKCHLALEEGLNLEIQAL
DIKIKEKNTKEKKTDIRSEKNEVKKDEGKEHAALEEDDTVKKKEKVASEQPDNEPMDQSV
PTMEQTDNKRATGEEKKSGRNEEPQYEPNSTEALDMDIVSVPSSVPEDIFETLESAMEIQ
TTADEQGSGNAGTDHETLNSNMKSNTPLKDTKSGSKLKASAKGSKELIVKLTPVSLSESS
VKDENSSLEKGSKDVDAAKENCDSVKQNHNAGSERSTENETVSLAEESDLRRSPRVKTTP
LRRQTDMNPLTSNSEEDSNDTCNEKRKRKSSKQPRRKKDKRNSSDSTVDGPKPNKLSKSK
KPNILDNSSDSDEMPAVLKEVAMMSRSSSDIDSNSEALANDQKPLNVLKKEPVKDENGKR
KRKSSSSGSDLDAKRGKSAKNSAAAKKKRQNYSDSSNYDSELEKEIKSLSKIESAKKAKK
KYSRKDDSYDSSEEEQRKKVTKRKTNLKKQRGKSSEDDAAEKSSPEKEINHSSEDKKISV
GSDAKEEVNTDLEEKAVKGKQDESSDVEKSLLEKEGSSPKRVKPSEVKKNKDLKKKKAQE
DSSSESAEKHAKKEQNLDSPKEKFKNKKRLERKEKKSENLKKKSFKKEHDDSSSDVEKSS
PEKGSCNSSENDKTKNETMAKEKKRRNLRERGSKREQIDLSSDAEKSPLKEESSSEDAVR
NKKQSETKEKKKISHKKKITKKEQNDSSSSDEESYEGNKKKVKRGSVKESKKNNLKEKKK
VSKKVVVTSSSSSDKEENDEQNSTGDGSSDEQKIMPVTENLMLSAGTGFCQSSGDEGDPK
SRAVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDEESDEGKKKTGKQNENT
ADDEENEKEEDNSESDSEEEDSKKPRYRHRLLRHKLTVSDGESGEEKKGKPKDTKEGKRR
NRRKVSSDDSNESEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIK
VQEDSSSENNNKSNSEDEENDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRI
AEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDG
VQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCP
LNTALNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYR
NLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILT
GTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHIL
YEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGSGNEGGRGK
AGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDDFIASDSDETSMSLSSDDY
AKKKKSKGKKVKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEELVNNPPSVTKSDEG
KATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLIS
LDLIEDFLELANREKTDKDKAPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETN
VRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLA
QGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRD
TPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTM
RFNMPTGTNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNNVTAARI
QPLEDIISTIWKENVTLTESQVQALALSRQASQELDVKRREAIYNDVLTKQQMLIGCVQR
ILMNRRLQHQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVSGGM
QPPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggagcccatgagtgaaagcaagttgaatacattggtgcagaaactccatgac
ttcttggctcactcatcggaagaatctgaggacgcaaattctcctccagcgttatctaaa
aacaaaaccataggtaaaagtagagaacctgagagtagtccaacatcaatggagaacaac
agagaagagggcagcagctcttcagaaagaatgaagtccttaggatcatcacgttcaaaa
aggaaacctacaattgtaacaaaatatgttggatcagatgatgaacaaatcttagatgag
actgtaaatgaagataattcaaatgaaaactcagaaaatgatgttgatatgaaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacccgaagctcccaaaaag
cgtggagaggaaggactacatggaattgtaagctgtacagcttgtgggcaacaggtgaac
cattttcaaaaggattcaatctatagacatcctacactgaaagttcttatttgtaagact
tgctacaagtattacatgagtgatgacataagccgtgattcagatggaatggatgaacag
tgtaggtggtgtgctgaaggtggaaacttgatttgctgtgacttttgccataacgccttc
tgtaaaaagtgcattttgcgcaacctgggtcgaaaggagctgtcaaccatactggatgaa
aataatcagtggcactgctatatttgccatccagagcctctattggacttggtcactgct
tgtgacagtgtctttgaaaacttggaacagttactgcagcaaaacaaaaaaaaggccaag
gtggaaagtgaaaaaagtaaaatatatgaccacacagtcaaattttctccaaagagaaat
aattcaaattgcaacggtgaagaaaaaaaactagatgattcatattcaggttcactgaca
tactcttataaagcactaatggtgccaaaagacatgcttaaaaaaacaaaaaaactggtt
gagactacggcaaatatgaattctagctttgtaagctttttgaaaaaggctgcagaaaat
ttagaaataagcccagctgtgcagcttcgtcagctaaaagcttttaaatctgtgctgggt
gacatcaaaaaatgtcacctggcactagaagaaggtctgaacctggagattcaagcattg
gatattaaaatcaaagagaaaaataccaaagagaaaaaaactgatattagatcagaaaaa
aatgaggtgaagaaagatgaaggaaaggaacatgcggcattagaagaggatgacactgta
aagaagaaggaaaaagttgcatcagaacagcctgacaatgagccaatggatcaaagtgtt
ccaacaatggaacaaacagataacaaacgtgcaactggtgaagagaaaaagtctggcaga
aatgaagaacctcagtatgaacctaatagtacagaggctttagacatggatatagtgtct
gttccctcatccgttcctgaagatatttttgagactctagaatctgccatggaaattcag
actacagcggatgagcaaggcagtggaaatgcaggaacagatcacgagactctaaactca
aatatgaaatcaaacactcctttgaaagataccaaaagtggatctaagttaaaagcttcg
gctaagggatcaaaggaactgattgtaaaactgactcctgtttccctttcggagtcttca
gttaaagatgaaaacagcagtctcgagaagggaagtaaggatgttgatgctgcaaaagaa
aactgtgactccgtaaaacaaaatcataatgctggcagtgaacgttccacagagaatgaa
accgtttcacttgcagaggaatctgatctcaggagatcaccccgtgtgaagaccacgcct
ctgaggcgccaaacagacatgaatcctttaacgtcaaattcggaagaagatagcaatgac
acgtgtaatgaaaaacgtaagagaaaatcatcaaaacaaccgaggaggaaaaaagataaa
agaaactcttctgacagtactgttgatggtcctaagcctaataagctttctaaatcaaaa
aagccaaatatactagataatagctcagattctgatgagatgccagctgttcttaaagaa
gtagctatgatgagtcgcagttcttcggatattgatagcaatagcgaagcactagcaaat
gatcagaagcctttaaatgttctgaagaaagaaccagtaaaggatgaaaatggaaagcga
aaaagaaaaagttccagttctggttcagatttagatgctaaaaggggcaaatctgccaaa
aattctgctgctgcaaaaaagaaacgacagaactattcagattcttcaaactatgattct
gagttagaaaaagagataaaaagcttgagtaaaattgagtctgcaaaaaaagctaagaaa
aaatactccagaaaagatgacagttatgattcctctgaggaagagcagaggaagaaagtt
accaaaagaaagacaaatctgaagaaacagagaggtaaatcttctgaagatgatgctgct
gaaaagtcatccccagagaaggagattaatcattcttctgaagataaaaaaattagtgtg
gggtcggatgctaaggaagaggtaaacacagacttggaagaaaaagctgtaaagggaaag
caagatgagtcttctgatgttgagaagtctttactggagaaagaggggagctctcctaaa
cgtgtaaagccaagtgaagttaagaaaaataaggatttgaagaaaaaaaaggcacaggaa
gattcctcttcagagagtgctgagaaacatgcaaagaaagaacagaatttggattctcca
aaagagaaattcaagaacaaaaaaagattagaaagaaaagagaagaaatctgaaaatttg
aagaagaaaagcttcaagaaagaacatgatgattcctcttctgatgttgaaaagtcgtcc
ccagagaaaggcagttgcaattcttctgaaaatgacaaaactaaaaatgaaacaatggct
aaagaaaagaaaaggaggaatttaagagagagaggatcgaaaagagaacagattgatttg
tcttccgatgctgagaaatctcctctgaaagaggagagttcttctgaagatgctgtgcgg
aataaaaaacaaagtgaaactaaagaaaagaaaaaaataagtcacaaaaagaaaatcacc
aagaaagaacagaatgactcatcctcttctgatgaggagtcttatgaaggcaataagaaa
aaggttaagagggggtcagtgaaagaaagtaaaaagaataacttaaaagagaaaaagaaa
gtgtcaaaaaaggttgttgtcacttcttcatcctcatctgataaggaagaaaatgatgag
cagaattccacaggtgatggaagcagtgatgagcagaaaattatgccagtgactgaaaat
ttaatgctgtctgctggcacaggattttgtcagtcatcaggagatgagggagaccctaaa
tcaagggctgttccaatggaggaggaggaagatgatgatgatgacgatcctgagaataga
attgccaagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatgca
tcttcagatgaagagtcggatgaaggaaaaaagaaaactggaaaacaaaacgaaaacaca
gcagatgatgaagagaatgaaaaggaggaggataattccgaatcagattcagaggaagaa
gactcaaagaagcccagatacagacacagactgctgaggcacaagctgacagtgagtgat
ggagaatctggtgaagaaaaaaaggggaaacctaaagacacaaaagaggggaagcgcaga
aatagaaggaaagtgagcagcgatgattcaaatgaatcagagtttcacgaatcagctgtt
agtgaagaagtcagcgagtctgaagatgaccaacgtccaagaacaagatctgccaagaaa
gctgaggcagaagaaaatcagcgcagttacaaacagaaaaagaaacggaggcgtataaag
gttcaagaggattcttcaagtgaaaacaacaacaagagtaattctgaggatgaagaaaac
gacgattcaaaatctcctggaaaaggcagaaagaaaataaggaagattattaaagatgat
aagcttagaacagaaacacaaaatgcacttaaagaggaagaagaaagaagaaaacggata
gcagaaagagaacgggagagagagaagttgagagaggtgatagagatagaagatgcttca
cctctgaaatgtcccattacaactaagctggttttagatgaagatgaagaaacaaaagaa
ccattagtgcaggttcacaggagtatagttaccagactgaaaccacaccaagtagatggc
gttcagttcatgtgggattgctgttgtgaatctgttaaaaagacaaagacgtctcctggt
tcaggatgcattcttgctcactgtatgggtctggggaaaacattacaggtagtaagtttt
cttcacacagtcttgctttgtgacaagctggatttccggacggctctggtagtgtgtccg
ctgaacactgccttgaactggttgaatgagtttgaaaaatggcaagaaggtttagaagat
gacgagaaattagaggtctgtgaactagcaactgtgaaacgcccccaagagagaagctat
atgctccagcgttggcaagatgagggaggtgtgatgatcataggctacgagatgtatcgc
aatcttgcacaaggcaggaatgtgaagagtagaaaacttaaagaaatatttaataaagct
ttagttgatccaggccctgactttgttgtttgtgacgaagggcacatattaaaaaacgaa
gcatctgctgtttctaaggcaatgaattctattcgatccaggagaagaataatccttaca
ggaacaccactgcaaaataatcttatagaatatcactgcatggttaactttattaaggag
aatttgcttggttccattaaagaattccgaaatcgattcataaatccgattcagaacggt
cagtgtgcggactccactctggtagatgtcagagtaatgaagaagcgtgcacatattctc
tatgagatgttagctggatgcgttcagaggaaagattacacagcgttaacaaagttcctc
ccaccaaaatatgagtatgttctagaagttagaatgacacctattcagtgcaaactctac
cagtactacttggatcatttgacaggtgtaggtagtggcaatgaaggtggacgaggcaaa
gctggagctaaactattccaggatttccagatgttgagcagaatctggactcacccctgg
tgtttgcagctggactatattagcaaagaaaataagggctattttgatgaagacagtctg
gatgacttcatagcttcagattctgatgaaacttcaatgagtttaagctctgatgattat
gcaaagaaaaaaaaatccaaggggaaaaaagtgaagaaagagtgtagctcaagtgggagt
ggcagtgataatgatgtagaagtcataaaagtttggaattcaagatctcgtggaggtgga
gaaggaaatgcagaagaacttgtaaacaatcctccgtcggttacaaaatcagatgaaggt
aaagctacatcatcttcaaatcctggtagcccagctccagactggtacaaagattttgtc
actgatgcagatgctgaagtgttggaacattctgggaaaatggtgcttctctttgaaatt
cttcgaatggcagaggagcttggggacaaagtcctagtgtttagccaatccctaatatca
ctggatttgatagaagattttctggagctggccaacagggagaaaactgacaaagataag
gctcctatttataaaggtgaaggaaaatggttcagaaacattgattactatcgcttagac
ggctcaactacagctcagtcaagaaagaaatgggctgaagaatttaatgatgaaactaat
gtgagaggccgcttgtttattatctccactaaagcaggctcccttggaattaatcttgtg
gctgctaatagagtaatcatttttgatgcttcttggaacccatcgtatgatatccagagt
attttcagggtttaccgctttgggcagaacaaacctgtgtttgtgtacaggtttttggct
cagggaacaatggaagataagatctatgatcgacaggtaacaaagcagtcgctgtctttc
cgggttgttgaccaacagcaagttgaacgtcatttcactatgaacgagctcacagagctg
tatacttttgagccagatttgctggatgaccctaattcagaaaagaaaaagaagagagat
acaccgatgctgcctaaagatacaattctggcagaattgcttcagatcaataaagagtat
atagtcggatatcacgaacatgattcactcctggaccataaggaggaagaggagctcact
gaggaagaaaggaaggcagcatgggcagaatatgaagcagaaaagaagggcttgaccatg
cgtttcaacatgccgaccgggaccaacatgcttcccacaaatttcaactctcagaccccg
tatattcctttcaacttgggtgctctgtcagcaatgagcaaccagcagctggaggacctc
attaatcaaggaagagagaaagttgtggaagcaaccaacaatgtaactgcagcaagaatt
cagccccttgaagacatcatttcaacaatatggaaagagaatgtaacactcacagagagc
caagtacaggccctggccctaagcaggcaggcaagccaggagcttgatgttaagcgccga
gaagccatctataacgacgtccttactaaacaacagatgttaatcggttgtgttcagagg
atacttatgaacagaagactacagcatcagtacaatcagcagcaacagcagcagatgtcg
taccagcaagcagcaatgagtcatctcatgatgccaaagcctccaaatttaatcatgaat
ccttccaactaccaacagatagatatgagaggaatgtatcagtcagtgtctggtggtatg
caaccaccacctttacaacgagcaccacccccaatgagaggcaaaaatccagggccttcc
caagggaaatcaatgtga
DBGET
integrated database retrieval system
