Bucephala clangula (common goldeneye): 308449074
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Entry
308449074 CDS
T11949
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform 1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04080
Neuroactive ligand-receptor interaction
bcla04082
Neuroactive ligand signaling
bcla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
308449074 (GABRA1)
04082 Neuroactive ligand signaling
308449074 (GABRA1)
04519 Cadherin signaling
308449074 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bcla04040
]
308449074 (GABRA1)
Ion channels [BR:
bcla04040
]
Ligand-gated channels
GABA-A
308449074 (GABRA1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
308449074
NCBI-ProteinID:
XP_080814330
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Position
16:<1871572..1911275
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AA seq
479 aa
AA seq
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MKSQPISHPVYPGTYYYCLAKEKAFVRILVLCDCLWAWSLLLNALTERSYGQTSSQDELK
DNTTVFTRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQS
WKDERLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLY
TMRLTVRAECPMHLEDFPMDVHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLN
QYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNR
ESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY
FTKRGYAWDGKSVVPEKPKKVKDPLIKKNNTYTAAATSYTPNIARDPGLATIAKSATIEP
KEVKTETKPAEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcacagcctatttcacatccggtttaccctgggacgtattactactgtcttgct
aaagagaaagcttttgttagaatcctggtgctttgtgactgcctctgggcctggagcctc
ctcctaaatgcactgactgaaagaagctatgggcaaacctcatcacaagatgaacttaaa
gacaacaccacagtgtttaccagaatattggaccgtctgctggatggttatgataaccgc
ctgagaccaggactgggagagcgtgtaactgaagtgaagactgacatcttcgtcaccagt
tttgggcctgtttcagaccatgatatggaatacactatagatgtatttttccgccaaagc
tggaaagatgaaagattaaaattcaaaggacctatgactgttctccggttaaacaattta
atggccagcaaaatttggacacctgatacctttttccacaatggaaagaagtcagtggct
cataacatgacgatgccaaataaattattacgaattacagaggatgggacattgctgtat
acaatgagattgactgtgagagcagagtgtccaatgcatttagaagactttcctatggat
gtacatgcttgccctttgaaatttggaagctatgcttataccagagcagaggttgtgtat
gaatggacacgggaacctgcaagatcagtggttgtggctgaagatggctctcgactgaac
cagtatgatctgcttggacaaactgtggactctggaattgttcagtccagtacaggagaa
tatgttgttatgactacacattttcatttgaaaagaaagattggttactttgtcattcag
acttacctgccatgcatcatgacagtgatactgtcacaggtgtccttctggcttaacaga
gaatctgttccagcaagaactgtatttggagtaacaactgtcctaacaatgactacgttg
agcattagtgcaaggaattcactacctaaggtggcctatgccactgctatggattggttt
atagcagtttgttatgccttcgtgttttctgcactcatcgaatttgcaacagtgaattac
ttcacaaagagaggttatgcatgggatggcaaaagtgtcgttcctgaaaagccaaagaaa
gtgaaggatcctctcattaagaaaaacaacacatacacagctgcagctacaagctacacc
cctaatattgcaagggaccctgggctggcaaccattgctaaaagtgcaacaatagagccc
aaagaagttaagacagaaacaaaacctgcagaacccaagaaaacttttaacagcgtcagc
aaaattgatcgactatcaagaatagccttcccattgctttttggaatctttaatttagtc
tactgggctacctatttaaaccgggagccccagttaaaagccccaactccccaccaataa
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