Bucephala clangula (common goldeneye): 308449138
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Entry
308449138 CDS
T11949
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04080
Neuroactive ligand-receptor interaction
bcla04082
Neuroactive ligand signaling
bcla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
308449138 (GABRA6)
04082 Neuroactive ligand signaling
308449138 (GABRA6)
04519 Cadherin signaling
308449138 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bcla04040
]
308449138 (GABRA6)
Ion channels [BR:
bcla04040
]
Ligand-gated channels
GABA-A
308449138 (GABRA6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Cyclin_N
DUF4396
Motif
Other DBs
NCBI-GeneID:
308449138
NCBI-ProteinID:
XP_080814451
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All DBs
Position
16:<1796417..>1820672
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AA seq
465 aa
AA seq
DB search
MALLIAWLCVVVSMEKALGGQGNAGDLYSENITRILDKLLDGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPTEILRLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLHSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYAIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQRAMRKAARAAALAAALSAATVPAEDEI
VSHSDSNCNLKKRVNSVASQADQSPEASIISNSASQYQPVSVPPPATPAPPPIGGTSKID
QYSRILFPVAFAGFNLVYWVVYLSKDTMEFFEPTAMHLRNDHQSN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctttgctcatcgcttggctctgtgtggtcgtgagcatggagaaggctctggggggc
cagggcaacgcgggggacctctactcggaaaacattactcggatcctcgacaagctgttg
gacggctacgacaacaggctccggccgggatttggaggcgccgtcacagaagtcaaaaca
gacatctacgtgaccagcttcgggccggtgtccgacgtggagatggaatacacaatggat
gtcttctttcgtcagacatggactgatgagaggttgaagtttggtggaccaactgaaatt
ttgagattgaacaatttaatggtcagtaaaatctggacaccagacacattttttagaaat
ggaaaaaaatcaattgctcataatatgacaactcctaacaaacttttcagaattatgcag
aatggaactattctttacacaatgagactaaccattaatgctgattgtcctatgcggttg
gtgaacttcccaatggatggacatgcttgtccgctgaagtttggaagctatgcttatcca
aaaagtgaaatcatttatacatggaaaaaaggacccctgcactcagtagaagtaccacaa
gagtcttccagtctcctccagtatgacctcataggacaaactgtatctagtgaaaccatt
aaatctaacacaggtgaatatgcaatcatgacagtttatttccacttgcaaaggaagatg
ggctacttcatgatacagatatatactccttgcattatgacagtcattctttctcaggtg
tctttctggatcaacaaggagtctgttccagccagaacagtttttggaattaccacagtt
ctaacaatgaccactttaagcatcagtgcacgccattctttgcccaaggtgtcctatgct
actgccatggattggttcatagctgtgtgctttgcattcgtcttctctgcacttattgag
tttgcagctgtcaactactttaccaatcttcagactcagagagcaatgaggaaggcagca
agggcagcagcactggcagcagcactatcagcagcaactgtaccggcagaggacgagatt
gtctcgcattctgactccaactgtaacctgaagaagagagtaaactctgtagcgtctcag
gcagatcaatctcctgaagccagcataatatcaaatagtgcatcccaatatcaaccagtg
tctgttcctccaccagccaccccagcaccaccacctattggaggcacaagtaaaatagac
cagtattctaggatcctcttcccagtggcatttgcaggattcaacctggtatactgggtt
gtttacctttcaaaagacactatggaattttttgaacctactgcaatgcatcttcgaaat
gaccatcagtccaactaa
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