Bucephala clangula (common goldeneye): 308450827
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Entry
308450827 CDS
T11949
Symbol
ITGB4
Name
(RefSeq) integrin beta-4
KO
K06525
integrin beta 4
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04382
Cornified envelope formation
bcla04510
Focal adhesion
bcla04512
ECM-receptor interaction
bcla04518
Integrin signaling
bcla04810
Regulation of actin cytoskeleton
bcla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308450827 (ITGB4)
04518 Integrin signaling
308450827 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
308450827 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
308450827 (ITGB4)
04810 Regulation of actin cytoskeleton
308450827 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
308450827 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bcla04147
]
308450827 (ITGB4)
04515 Cell adhesion molecules [BR:
bcla04515
]
308450827 (ITGB4)
04090 CD molecules [BR:
bcla04090
]
308450827 (ITGB4)
Exosome [BR:
bcla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
308450827 (ITGB4)
Exosomal proteins of bladder cancer cells
308450827 (ITGB4)
Cell adhesion molecules [BR:
bcla04515
]
Integrins
Integrin beta subunits
308450827 (ITGB4)
CD molecules [BR:
bcla04090
]
Proteins
308450827 (ITGB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
FN3_DSCAM-DSCAML_C
EGF_Teneurin
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_TEN
SEA
Fn3_PBP1
vWA_SIBA-E
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
308450827
NCBI-ProteinID:
XP_080817383
LinkDB
All DBs
Position
20:complement(<5917353..>5938118)
Genome browser
AA seq
1871 aa
AA seq
DB search
MCFRRKRMAALPRACAGLLLLSLLCTTTLCQRSKNNRCVQSRAKSCSECIRVDKECSFCT
EESFEEPRCDLRENLLRYGCGEASIVYMRGEMRTEQNISINTRLQRTQVAPQGMFMRLRA
GEEMSFNMDVFQPLESPVDLYILMDFSYSMSDDLDNLKSMGHHLAEFLQELTSNYTIGFG
KFVDKVSSPQTDMRPEKLREPWNNADSPFSFKNVIHLTNNINYFSEELRKERISGNLDAP
EGGFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEKCHLDT
KGTYVYDTKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISAIGVLQEDS
SNIVELLRMAFERIRSKMDIRADYVPKALKTEFSSSMYQKTESGSFNITRGEVGKFKMRV
KALEYVGGQHVCSLPEKDRQGVIHVKPTSLSDSLEVRASVVCDVCPCEQHADLSSPKCNS
RGDFICGQCLCHAGWQGDTCDCSLESSSNKTECIRPGDDKVCSGRGECICGKCQCDLEGQ
VQRFDGDFCQYDVLQCPRTSGFLCNDRGRCSKGACVCESGWEGPGCECPTSNDTCIDSRG
GICNNQGRCECGRCICDKASVYISSTCEISYSLGFQAICESIRDCVQCQAWGTGNRKGNC
STCHLQVQMVEELKKEEANEHCSFQDEEDDCTYHYTLKGDPSVLPNATVQVQKKVLLSLA
ECPPGSFLWLIPLLIFLILLLGLLLLLCWRFCACCKACLALLPCCARGRTVGFKEDHYML
RQSLMSSDHLDTPMVRSGSLKGRDTVRWKINNNVHKQGFASHAATANPKDLIPYGLSLRL
TRLFTQNLMKPESRECEQLRKEVEENLNDIYKHIPGCHKLQQTKFRVQPNSGKRQDHTIV
DTVLTAPRSAKTDIIKVTEKHVSHEAFNDLKVSPGYYTVTSDQDAHGMVEFQEAVELVDV
RVPLFIREDDDDEKQLQVEAIDVPTGIAEIGRRLVNITIIKEQASSLITFLQPAYSHSRF
DKVAKIPVLREIIDNGKSQVTYRTRDLTAKDGRDYVFAEGDLIFQPGETRKEVQVSLLEL
TEIDTLLHNCQLKQFAIDLLHPKYGAKIGRYPQTTVTIADPEVVDGVPPLTGMGQVTQSP
KGRLGAPLNPNAQALSSRKIRFSWFPPPGKPLGYKVKYWIQGDPESEAHLIDVKSPSAEL
NNLYPFCDYEMQVCAYNATGEGVYSDIIHCRTLEDVPSEPGRLAFNVVSSTVTQLSWAEP
AETNGEITAYEVSYGLVNEDNIPIGPVKKVLVEDPKKRMVLIENLRESQPYRYMVKARNS
AGWGPEREATINLATQPKRPLSIPIIPDVPIIDAEGGEDYDSYLMYSSDVLRSPAGSKHP
SVSDDSGSRWKYVQLLGEDLDLRRITWRLPPETIPRLSGSSHLSSDTEGLLREEDSDVAT
GSLMRSGTPRPQAEHLLNGRVDFSGSSGTLTRATNTSYHQLSSHVQQEHRVMGSSSLTRD
YSTMMMGHDYPGRPLPPIREDAGRTIPLPRDVGFRSRAKVKGYYPSTGFRDSIIMTDGSA
GICKYIDSRLPLGVPDTPTRLVFSALGPTSLKVSWQEPHCEKEVQGYSVQYQLLNGGEVH
RLTIPNPSQNSVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPG
SPFTLSTPSAPGPLVFTALSPDSLQLSWERPRKPNGAILGYMVTCEMLHGGGEPRNIYVE
GDNPETTLTVPHLSENIPYKFKVQAKTTQGFGPEREGIITIESQDGGTFSQFGGQQYMRE
VYNFPTEYTTKTSISHSSLDPHFSDGMLMTTQRVESASSTLTKHVTKEFVSRTVMSSGTL
TKQMERQFYEA
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcaggaggaagaggatggctgccctgccgagggcgtgtgccgggctgctgctg
ctgtccctgctctgcaccaccaccctctgccaaaggagcaaaaataaccgctgtgtgcag
agccgggcaaagagctgctctgagtgcatccgagtggacaaggagtgctccttctgcacc
gaagagagctttgaggagccccgctgcgacctgcgggagaacctgctgcgctacggctgc
ggggaggccagcatcgtctacatgaggggcgagatgcggacagagcagaacatcagcatc
aacacgcgcctgcagaggacccaggtggccccccagggcatgttcatgcggctgcgggct
ggggaggagatgagcttcaacatggatgtcttccagcccctggagagccccgtggatctt
tacatcctcatggacttctcctactctatgtccgatgatctggacaacctcaaaagcatg
ggccaccacctagctgagttcctgcaagagctgacctccaactacaccatcggcttcggc
aagtttgtggacaaagtctcatccccgcagacagacatgaggcctgagaagcttcgcgag
ccctggaacaacgccgactcccccttctccttcaagaacgtcatccacctgaccaacaac
atcaactacttcagcgaggagctcaggaaggagcgcatctccggcaacctggatgccccc
gagggtggctttgatgccatcctgcagacagctgtgtgcaaggacaagatcggctggagg
aaggacagcacgcacctgctcgtgttctccaccgagtctgcatttcactacgaagctgac
ggcaccaatgtcctggcagggatcctggcaaggaacgacgagaagtgtcacctggacacc
aagggcacctatgtgtatgacaccaagcaggactatccctcagtgcccaccctggtgcgc
ctgctgggccagcacaacatcatccccatctttgctgtcaccaaccactcctacagctac
tacgagaagctgcacaagtatttccccatctctgcaatcggggtgctccaggaagactcg
tccaacatcgtggagctgcttcgcatggccttcgagcgcatccgctccaagatggacatc
cgggctgactacgtccccaaggccttgaagacagagttcagctcctccatgtaccaaaag
acagagtctggctccttcaacatcacccgtggggaagtgggcaaattcaagatgcgcgtg
aaggcgctcgaatacgtcggcgggcagcacgtctgcagcctcccggagaaagaccgtcag
ggagttatccacgtgaagcccacatccctgagtgacagccttgaagtcagagcctcggtg
gtctgcgatgtgtgcccttgtgagcagcacgcagacctctcctcacccaagtgcaactct
cgtggggacttcatctgtggacagtgcctctgccacgcaggctggcaaggggacacgtgt
gactgctccctggaatcgtcctccaacaaaacagagtgcatccgccctggggatgacaag
gtgtgctcgggccggggtgagtgtatctgtgggaagtgccagtgcgacctcgagggccag
gtgcagcgctttgacggggacttctgccagtacgacgtcctgcagtgcccgcgcacctcc
ggcttcctctgcaacgatcgcggtcgctgctccaagggtgcttgcgtgtgtgagagcggc
tgggagggcccgggctgcgagtgtcctacgagcaacgacacctgcatcgacagccggggg
ggcatctgcaacaaccaggggaggtgcgagtgcggcaggtgcatctgtgacaaggcatcc
gtgtacatcagctccacctgcgagatcagctactccctgggtttccaggccatctgcgag
agcatccgggactgcgtccagtgccaggcctggggaacgggcaacaggaaagggaactgc
agcacgtgccacctccaggtccagatggtggaggagctgaagaaagaggaggccaacgag
cactgctccttccaggacgaggaggatgactgcacctaccactacaccctgaagggagac
cccagtgttctccccaatgccaccgtccaggtgcagaagaaagtgctgctgtcccttgca
gagtgccctccgggaagcttcctctggctcatcccactgctcattttcctgatcctcctc
ctggggctgctgctgctgctgtgctggaggttctgcgcctgctgcaaggcttgcctggcc
ctgcttccctgctgtgcacgaggtcgcacggttggcttcaaggaggaccactacatgctg
cgccagagcctcatgtcctccgaccacctggacacccccatggtccgcagcgggtccctc
aagggccgggacaccgtccgctggaagatcaacaacaacgtccacaagcagggcttcgcc
tcccacgccgccaccgccaaccccaaagatctcattccctacgggctgtctctgaggttg
acccggcttttcacacagaacctcatgaagccggagagccgggagtgcgagcagctgcgc
aaggaagtggaggagaacctgaacgacatttacaagcacatcccaggctgccacaagctc
cagcagaccaagttcagggtacagcccaattctgggaaaaggcaggaccacaccatcgtg
gacactgtgctcaccgcccctcgctcagccaagacagacatcatcaaagtcaccgagaag
catgtctcccacgaggctttcaacgacctgaaggtttctccaggttattacaccgtgacc
tcggatcaagatgctcacgggatggtggagttccaagaagccgtggagctggtggatgtc
cgtgtcccgctcttcatcagggaggatgatgatgatgagaagcagctgcaggtggaggcc
attgatgtccccaccggcatcgcagagattggacgcaggctggtcaacatcaccatcatc
aaagaacaagccagcagcctcatcaccttcttgcagccagcctattcccacagccgcttt
gacaaggtggccaagatccctgtcctgcgggagatcatagacaacgggaagtcccaagtc
acctacaggacccgagatctcaccgccaaggacggcagggactacgtctttgcagaaggc
gacctgatcttccagcccggcgagactcggaaagaggtgcaggtctccctgctggagctc
actgaaatagacaccctcctgcacaactgccagctcaagcagttcgccatcgacctcctc
catcccaagtacggcgccaagatcggccgctacccccagaccacggtgaccatcgctgac
ccagaggtggtggatggtgtccccccactgactggcatgggccaggtcacccagtccccc
aaaggccgcctgggtgcaccactgaatcccaatgcccaggctctcagctccaggaaaatc
cgcttcagctggtttcctccgccaggaaaacccctggggtacaaggtgaaatactggatc
cagggggaccccgagtcagaagctcacctcatcgatgtcaaatcaccatcggcagaactg
aataacctctaccccttctgcgactacgagatgcaagtctgtgcctacaacgccacaggt
gaaggggtctactccgacatcatccactgccgcacgctggaggacgtgcccagtgagcct
ggccgcttggctttcaatgttgtctcttccaccgtgacgcagctgagctgggctgagccc
gcagaaaccaacggggagatcacagcatatgaagtcagctacggactcgttaacgaggac
aacatacccattggcccagtgaagaaggtgctggtggaagacccaaagaaacgcatggtg
ctgatagaaaacctgcgggagtcccagccctaccgctacatggtgaaggccagaaatagt
gctggctgggggcctgagagagaagccaccatcaaccttgctacacagcccaagcgtcca
ttgtccatccccatcatccccgatgtccccatcatcgatgctgaaggaggtgaggactat
gacagctacctgatgtacagctcagatgtgcttcgttctccggctggtagcaagcatccc
agcgtctctgacgattcaggctccaggtggaaatatgtgcagctgctgggagaagacttg
gatcttcgccgcatcacctggaggctcccacccgaaactattccccgcctctctggcagc
agccacctctcctcggacaccgagggtctcctccgcgaggaggacagcgacgtggctact
ggcagcctgatgaggagcgggaccccccggccccaagcagagcacctgctgaatggccgg
gtggacttctccggcagcagcggcacgctgaccagggcgacaaacaccagctaccaccag
ctgagctcacacgtgcagcaggagcacagggtgatgggcagctcctcgctgaccagagac
tactccacgatgatgatggggcacgattacccagggagacccctccctcccatccgtgaa
gatgctgggaggacaatcccgctgccccgggatgtgggtttcaggagcagggcaaaggtg
aagggttactaccccagcactggctttcgggactctataatcatgactgatgggtccgca
gggatttgcaagtacatagattccaggctgccgctgggcgtccccgacaccccgacccgt
ttggtcttctccgccctggggcccacctccctgaaggtgagctggcaggagccgcactgc
gagaaggaggtgcagggctacagcgtgcagtaccagctgctcaatggaggagaggtgcac
cgcctcaccatccccaaccccagccagaactcggtggtggtggaggacctgctgcccaac
cactcctacatcttcaaggtgaaggcacagagcgaggagggctggggccctgagagggaa
ggagtcatcaccatcgagtcccaggtggacccgcagagcccactcagccctgttccagga
tcccccttcacgctgagcacacccagtgctcctggaccactggttttcaccgccctcagc
cccgattccctgcaactcagctgggagaggccccgcaagcccaacggggccatcctgggc
tacatggtcacctgcgagatgctgcacggaggaggggagcccaggaatatctacgttgaa
ggagacaatccagaaacaaccctgaccgtgccccacctgagcgagaacatcccgtacaag
ttcaaagtgcaagccaagaccacccaaggcttcgggccagagagagaaggcatcatcacc
atcgaatctcaggatggaggcaccttctcacagtttggaggacagcagtacatgagagaa
gtgtacaactttcccactgaatacaccaccaaaaccagcatcagccactcctccctggac
ccccacttctcagatggcatgctgatgacgacccagcgggtggaaagcgccagcagcacc
ctcaccaagcatgtcaccaaagagttcgtcagcaggaccgtgatgtccagtgggaccctc
accaagcagatggagaggcagttctacgaggcctga
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integrated database retrieval system
