Bucephala clangula (common goldeneye): 308451628
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Entry
308451628 CDS
T11949
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform 1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
bcla
Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcla03021
]
308451628 (MED13)
Transcription machinery [BR:
bcla03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
308451628 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
308451628
NCBI-ProteinID:
XP_080818757
LinkDB
All DBs
Position
22:complement(3237843..3292917)
Genome browser
AA seq
2194 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQADAGYALEDKGVMGPESVILSPFGLNGTLTGQSFK
LSDSSTKKLIGEWKQFYPVTSNLKEGSEEKQEDMDWEDDSLAAVEVLVAGVRMVYPACFV
LVPQTDIPTPSTVGASHCSTTCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQ
KWVKFSSVSDGFISDSTSHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCD
EETADKVASWDFVEATQRTNCNCSRHKNLKPRNSGQQGQAPPVGQQQQAAPKHKTNEKQD
KGDKPQKRPLTPFHHRVSISDDVAMEADSASQRLVMTAPDSQVRFSNIRTNDVAKTPQMH
NAEMANSPQPPPLSPHPCDVVDEGVTKAPSSPQHFYQMPTPDPLVPTKTMEDRLDGLSQP
FPAQFPEVIEPTMYVGTAVNLEEDEADTTWKYYKVPKKKDVEFLPPQLPSDKLRDDAVIP
AEQENITSVTELMVQCRKPLKVSDELVQQYQSKNQYLAAVVSEADQEPEIDPYAFVDGDV
EFLFPDSKKDRQNIEREAGKKHKAEDGASSVTVLSHEGEDAMSLFSPSVKQDAQRIAAHA
RTASTSLFHETDLVVSYTDLDNLFNSDEDELTPGSKRTVNGADDKSNCKEAKAGNLDPLS
CISTADLHKMYPTPPSLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSSVGAQFRIE
VDEGFCSPKPAEIKDYSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSW
TVGKLDLLPPGPAMPFIKDGDGSTMDQEYGPAYTPQTHTPFGMPPSSAPPSNSGAGILPS
PSTPRFPTPRTPRTPRTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVP
SIPEAHSLYVNLILSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCT
CGFSAVMNRKFGNSSGLFLEDELDILGRNTECGKEAEKRFEALRATSVEHGSGGLKEPEK
LPDELILLLQDQCTNLFSPFGAADQDPIPKVSAVSNLVRVEERDCCNDCYLALEHGRQFM
DNMSGGKVDEALVKTTCLHHWSKRNVLDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRS
WGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLE
PYGSQRDVAYVVVCPENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPT
ASKKLSEKLVTEWFSQTANANNEAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQTNLIP
PPSQPASALPPVTANAGNPNTPSSAPAAPTSSTMTATSTSAMSSAATTANSTLTTTATSS
SSANVGSGIPTNKPSSFPTFSSMNNTTSASLPTQAATVQNGQTGGQQQQPTLQAAGMSAD
TTSAPAQPHPEVSESTMDRDKVGVPTDGDSHAITYPPAIVVYIVDPFTYEKKDENSSSSS
LWTLGLLRCFLEMVQVLPPNIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFT
QCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETF
GEAGQKYNVLFVGYCLSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGL
QKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCG
ISAADSPSILSACLVAMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHI
LVFPTSASVQVASSTYTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPT
GSPVHSPGSHYPHGGDMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDW
FWSACPQAQNQCPLFLKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNAL
SWLTCDPATQDRRSCLPIHFVVLNQLYNFIMNML
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctaactgggattaaatggaagcgatatgtatggcagggtccaacgtct
gccccaattctcttcccggtcacggaagaggaccctattctgagcagcttcagtcgctgt
ctgaaggcggatgtactcagtgtttggcggcgagaccagagaccgggacgcagggagcta
tggatattttggtggggtgatgaccccaactttgctgacctaattcatcatgatctctca
gaagaggaagatggtgtttgggagaatggactttcttatgaatgtcgcactctacttttc
aaagccgttcacaacctgttggagaggtgcttaatgaatcggaattttgtgcgcattggg
aaatggtttgtgaagccctacgagaaagatgaaaaacctataaacaaaagtgagcatttg
tcctgctcgttcaccttcttcttacatggagatagcaatgtttgtaccagcgtggagatc
agtcagcatcaacctgtgtacctgcttagtgaagaacacctcacccttgcccagcagtct
aacagcccttttcaagcagatgcaggctatgctctcgaagacaaaggagtgatggggccc
gagtctgttattctaagtccctttggattaaatggcacactcacagggcagtcattcaag
ctttctgattcatcgacaaaaaagcttattggtgaatggaaacaattctatcctgtcaca
tctaacttgaaggaggggtctgaagaaaagcaagaagacatggattgggaagatgattct
ttagctgctgttgaagtccttgttgctggcgtgcgaatggtgtatccagcgtgcttcgtt
ttagttcctcagacagacatccctactcctagtactgttggggcgtctcactgttcaact
acttgcttgggtgtccaccaagtgcctgcttccacacgagatcctgcaatgtcttcagta
actctgactccaccgacatccccagaggaagttcaaacagttgatgctcaatctgcccag
aaatgggtgaagttttcttcggtttctgatggatttatctctgacagtactagccatcat
ggtggcaaaatacctagaaaactagctaatcaagtggtggacagagtttggcaagaatgc
aatatgaacagagcacagaacaagcggaaatattctgctacatcaaatggcttgtgtgat
gaagagacagctgacaaggtagcatcctgggattttgttgaagccacgcagaggacaaat
tgcaattgttcaaggcacaaaaatctcaaaccaagaaattcaggtcaacaggggcaggca
ccacctgtgggccagcaacagcaagcagctccaaagcacaagacaaatgagaagcaagac
aaaggggataagccacaaaaacgccctttgactccttttcatcatcgtgtatctatcagt
gatgatgttgccatggaggcagattcagcaagtcagaggcttgtgatgactgcaccagac
agtcaagtgagattttcaaatatccgaactaatgatgtagcaaagactcctcagatgcat
aatgctgaaatggcaaattcacctcaaccaccaccacttagtcctcacccatgtgatgta
gttgatgaaggggtaaccaaagctccttcttctcctcaacatttctaccagatgccaacg
ccagatcccttggttcccacaaaaacaatggaagacagacttgatggcttatctcagcct
tttccagcccaatttcctgaagttatagagcctacaatgtatgttggtactgcggtgaat
ttggaggaagatgaagcagatactacttggaagtattataaagttccaaagaaaaaggat
gtggaattcttaccacctcagcttccaagtgataaattgagagatgatgcagtaatacct
gctgaacaggaaaacataacatcagttacggaattaatggtgcaatgtagaaagccttta
aaggtttcagatgaactggtgcaacagtatcagagtaaaaaccaatacctagcagcagta
gtgtcagaagctgaccaggaacctgaaattgatccttatgcctttgttgatggtgatgtg
gaattcttatttcctgatagtaaaaaagataggcagaacatcgagagggaagctgggaag
aaacacaaggctgaggatggtgcatccagtgttacagttttatctcatgaaggagaggat
gctatgtctctgtttagtccttctgtcaagcaagatgcccaacgtattgctgctcatgct
cgcactgcatcaactagcctgttccatgaaacagacttggtggtctcctatactgacctt
gacaatctcttcaattctgatgaggatgaactaacacctggatctaaaagaacagtgaat
ggtgctgatgacaaatccaattgcaaagaggcaaaagcaggaaatttagacccgctgtca
tgcataagcactgcagatctccataaaatgtatccaactccaccttcattggaacagcat
attatgggattttcaccaatgaacatgaataataaggagtatggcagcatggacactaca
cttggaggaacagtacttgaagggaatagctctagtgtgggagctcagttcagaattgaa
gtagatgagggtttctgcagccccaaacctgctgaaataaaggattattcttatgtttat
aaacctgagaactgccaagccttagtgggatgttccatgtttgcaccactgaagacactt
cctagccagtgtctccctcccatcaagctgccagaagaatgcatttatcgccagagttgg
actgtgggaaagttggatttacttcctccaggacctgccatgccattcatcaaagatggt
gatggaagcactatggatcaagagtacggccctgcgtacacaccacaaactcatactcca
tttgggatgccaccaagtagtgcaccacccagtaacagtggagctggaattctcccttct
ccttccacccctcgtttcccaactcctagaacaccaaggactcctcggacacctcgtgga
gctggtggaccggcaagtgcacagggttcagtcaagtacgagaactctgatttatactca
ccagcttccacaccatcaacatgtagaccgcttaattctgttgaacctgcaactgtgcct
tccattccagaggcacacagtctttatgtgaatctcatcctttcagagtctgtaatgaat
ctcttcaaagactgtaactttgacagctgctgcatatgtgtttgcaatatgaacatcaaa
ggtgctgatgttggagtttacattcccgatccaacacaagaggcccagtataggtgtacc
tgtggtttcagtgctgttatgaatagaaaatttggcaacagttctggactgtttcttgaa
gatgaattggatattttaggacgtaatacagagtgtggcaaggaagcagaaaaacgcttt
gaagctctcagagctacttctgtcgaacatggcagcggaggactgaaagaacctgagaaa
ctgcctgatgagttaatactgttgctgcaagatcaatgcaccaacttgttctcaccattt
ggagcagcagatcaagatcctatccccaaagtcagtgcagttagcaacctggtacgtgta
gaagaaagggattgttgcaatgactgctacttagccttggaacatggacgccagttcatg
gacaatatgtcaggaggaaaagttgatgaagcacttgtgaaaacgacttgcttgcaccac
tggtcaaaaagaaatgttttggatgtgagcatgcagtgttcccaggacatcctgcgcatg
ctcctctcgctccagccagttcttcaggatgcaattcagaagaagcgaacagtccgatct
tggggtgtgcaaggccctctcacgtggcaacagtttcacaaaatggctggcagaggctct
tacggaactgatgagtccccagaaccactgccaatcccaacatttttgttgggatacgat
tatgattttctggtgctgtctccatttgcattgccgtattgggagaggctgatgttggaa
ccttacggatctcagagagatgttgcttatgttgtggtgtgccctgagaatgaggctctg
ctaaatggagcaaaaagcttctttagggatctgactgcaatatacgagtcgtgcagactg
ggtcagcacaggcctatctgtaaattactgcctgatggaatcatgagagttggacctact
gcttcaaagaaactttctgagaagttggtcacagaatggttctcacagacagctaatgcc
aacaatgaagcattttccaaactgaaattatacgcccaagtttgcagatatgaactaggt
ccttaccttgcttctcagcctttggacaactctttactttcccaaacaaatctgatccct
cccccaagccagccagcctctgctctgcccccagtgacggctaatgctggaaatcccaac
actccatcgtctgctcctgcagctcccaccagtagtactatgacagcaacatcaactagt
gccatgtcttctgcagctactacagctaattcaactttgacgaccactgccacgtcgtcc
tcttctgctaatgtaggcagtgggataccaacaaacaagccctcttcatttccaactttt
agcagtatgaacaataccacttctgcttccctgcccactcaggctgcaacagtccaaaat
gggcaaacaggaggacagcagcaacagccgacactgcaagcagcagggatgtctgcagat
actacttcagcacctgcacagccccatccagaggtttctgaaagcactatggatcgagat
aaagttggagtccctacagatggagattcgcacgctatcacctatccacctgcaattgta
gtttacatagttgatccttttacatatgaaaaaaaggatgagaacagtagctcatctagc
ttgtggacacttggacttctgcgctgctttttagagatggttcaggttcttcctcccaac
atcaagaatataatttctgtgcagattgtcccatgtcagtaccttctgcagcccgtgaaa
cacgaagaccggcagatttatactcagcatttaaaatctttggcattttcagcatttact
cagtgtcggagacctcttccaacttccaccaatgtgaaaacgttaactggctttggtcca
ggtttagccatggaaactgctcttaagagccctgatagacctgagtgtattcgactctac
acccctccttttatattggctcctgtaaaagacaagcaaacagaactaggagaaactttt
ggagaagctggccagaagtataacgtactttttgtaggctactgtttgtctcacgatcaa
agatggcttcttgcatcctgtacagatctctatggagaacagttagagacttgcataatt
aatattgatgtaccaaacagagctcgcaggaaaaagggctctgcccgcaggcttggtctt
cagaaactctgggaatggtgcttaggacttgtgcagatgagctctttaccttggagagtt
gtaataggacgtttaggaagaataggacatggggaattgaaagattggagttgtttgctg
agtcgccgaaatcttcagtccctcagtaagagactaaaagacatgtgcagaatgtgtggc
atctctgctgcagactctcccagcattctcagtgcttgtttggtagcaatggaaccacag
gggtccttcatcataatgccagattctgtatcgactggctctgtatttggacgcagcacc
actttaaatatgcagacatctcagctgaataccccacaggacacgtcatgcactcacata
cttgtgtttcccacatctgcttctgtgcaagtagcatcgtcaacttataccactgaaaac
ttggatttggccttcaacacaaacaacgatggagcagatggaatggggatctttgacttg
ttagacactggagatgatcttgatcctgatattataaatatacttcctgcatcccctact
ggatcccctgtacattctccagggtcccactacccccatggaggtgatatgggcaagggt
caaggtacagatcgattgctttcaacggaatctcatgatgaagtaacaaatatactgcaa
cagccattggcccttggttattttgtgtcaactgccaaagcaggtccattgcctgactgg
ttttggtcagcatgtcctcaagcacaaaatcagtgtcccttgtttcttaaggcctctttg
cacctccatgtgccttcagtgcaatcagacgagctactccacagtaaacactcccatcca
cttgattctaatcaaacttctgatgtgctcaggtttgttctggaacagtacaatgcactc
tcctggctaacctgtgatcctgcaacccaggacagacggtcatgtctcccaattcatttt
gtggtgctgaatcagttgtataactttatcatgaatatgctgtga
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