Bucephala clangula (common goldeneye): 308451664
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Entry
308451664 CDS
T11949
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform 1
KO
K04646
clathrin heavy chain
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04142
Lysosome biogenesis
bcla04144
Endocytosis
bcla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
308451664 (CLTC)
04142 Lysosome biogenesis
308451664 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
308451664 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bcla04131
]
308451664 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bcla04147
]
308451664 (CLTC)
Membrane trafficking [BR:
bcla04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
308451664 (CLTC)
Exosome [BR:
bcla04147
]
Exosomal proteins
Proteins found in most exosomes
308451664 (CLTC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
NEW1_HB
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
308451664
NCBI-ProteinID:
XP_080818821
LinkDB
All DBs
Position
22:complement(3437625..3468701)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcccatccgcttccaggagcacctccagctccaaaacctgggcatc
aacccagcaaacatcgggttcagcactctgacgatggagtctgacaaattcatctgtata
agagagaaggtgggagagcaggcgcaagtggtgatcatcgacatgaacgaccccagcaac
cccattcggaggccgatttcagccgacagtgctatcatgaaccctgccagtaaagttatt
gcattaaaagctgggaaaacacttcaaatattcaacattgagatgaagagcaagatgaag
gctcatacaatgacagatgatgtcaccttctggaagtggatctctctgaatactgttgcc
cttgtaacggataatgcagtctaccactggagcatggagggggagtcccagcccgtgaaa
atgtttgatcgccattcgagtcttgctggctgccagatcatcaactaccgtactgatgcc
aagcagaagtggctgctgctgactggcatatctgcacagcaaaaccgtgttgtgggagca
atgcagctctattctgtagatagaaaagtgtcacaaccaattgaggggcacgcagccagc
ttcgcgcagttcaagatggaaggaaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagttgcatatcattgaagttggtacgccaccgactgggaat
cagccatttccaaagaaagcagtggatgtcttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagatcagtgacaagcatgatgtggtgtttctgataacaaagtatggc
tatatccacttgtatgacctggaaactggcacctgtatctacatgaacagaatcagtgga
gagaccatatttgttactgcccagcatgaagcaacagctggaattataggagtaaacaga
aagggacaagtgctgtcagtatgtgtggaagaagagaatattattccctacatcaccaat
gtgctccagaatcctgacctggctttacgaatggctgtccgcaacaacctggcgggagct
gaggaactctttgctagaaaattcaatgcactgtttgcacaagggaactattcagaggca
gcaaaagtggcagctaatgctccaaagggaatcctgcgtactccagacaccatccgtcgg
ttccagagtgttccagctcagccaggacaaacttctcctttactccagtactttggtatt
ctgcttgaccaagggcagctgaataagtatgagtcgctggaactctgcagaccagtgctt
cagcagggacgcaaacagctcttggagaaatggttaaaagaagacaagctggagtgttca
gaggagctgggagatcttgtgaaatctgtagatcctacactagcacttagtgtctacctg
agagccaatgttccaaacaaagtcattcagtgttttgctgaaacaggacaagtccagaag
atcgttttgtatgctaagaaggttgggtatactccagactggattttcttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagacataacacaaattgtggatgtctttatggaatataacttaattcag
caatgtacagccttcttgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcatgcacctcaggttgcagatgctatcctg
ggaaaccaaatgtttactcattatgaccgggctcacatagctcagctgtgtgagaaagct
ggcttgctgcagagagcactcgaacacttcacagacttgtacgacatcaagcgtgcagta
gttcacactcatcttctcaatcctgagtggttagtgaactattttggctccttatcggta
gaagactcgctggagtgtctgcgtgctatgttatctgctaacattcgtcagaacctgcag
atctgtgtccaggtagcttcaaaataccacgaacaactgtcaacacaatcgcttattgag
ctctttgagtccttcaagagctttgaaggtttgttttatttcctgggctctattgtaaac
ttcagccaggatccagatgtgcacttcaagtatattcaagctgcatgcaagacagggcaa
attaaagaagtagaaagaatctgcagggaaagcaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcaccgaccagctaccgctcatcattgtgtgtgatcgc
tttgactttgtccatgacttggtgctgtacctgtacagaaataatctccaaaagtacatt
gagatttacgtacagaaggtgaatccaagccgcctgcctgttgttatcgggggactgctt
gacgtggattgctctgaagatgtgatcaagaaccttatccttgttgtgagaggccagttt
tcaactgatgaacttgtcgcagaggttgagaagagaaacaggctgaaattgcttctgccc
tggctggaagcaagaattcacgagggttgtgaggagcctgcaactcacaatgcgttggcc
aaaatatacattgatagcaacaacaacccggagagattcctgcgtgagaatccttactat
gatagccgtgttgttggcaagtactgtgagaagagggaccctcacctggcctgtgtggct
tatgagcgcggacagtgcgatttggaactcatcaatgtgtgcaatgagaactccctcttc
aaaagcctttctcgttacttggttcgccgtaaagaccctgaactgtgggccagtgtgcta
ttggaaagcaacccttacagaagaccactgattgaccaggttgtacagactgcgttgtca
gagacccaggatcctgaggaagtgtctgtcactgtgaaggccttcatgactgcagatctt
cctaatgagcttattgaactgttggagaaaatagttcttgataactctgtgttcagtgag
cacaggaatctgcagaaccttctaattcttacagctattaaggctgatcgcacccgtgtc
atggaatacatcaatcgcctggataactatgatgccccagacatagccaatatagctatc
agtaacgagctctttgaggaggcgtttgccatcttcaggaaatttgatgtcaacacatca
gctgtacaggtattaatagagcacattggaaacctggatcgtgcgtatgaatttgctgaa
cgctgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaaggaatg
gtaaaagaagcaattgactcgtatattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaaataccttcagatggca
cgcaagaaggcccgggagtcgtatgtggaaacagaactaatctttgctcttgctaaaaca
aaccgtctagcagagctagaggagtttatcaatggacccaacaacgcacatattcagcaa
gttggcgatcgctgttacgatgaaaagatgtatgaagcagctaagctgttgtataacaac
gtgtccaactttggccgtttagcctcaactttagttcacctaggtgaataccaggcggct
gtggatggagctcggaaagcaaacagtactcgcacgtggaaagaggtctgctttgcttgt
gttgatggaaaagagttccgtctggcccagatgtgtggacttcatattgtagtgcatgcg
gatgagttggaagagctaatcaattattaccaggatcgcggctactttgaagagctgata
actatgttggaggcagcacttgggcttgagcgagcacacatgggaatgtttacggagcta
gcaattctttactccaagttcaaaccacagaagatgagggagcacttggaactgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaggcccatctctgggctgaa
ctggtgttcttgtatgataagtatgaagaatacgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaagggcagttcaaagatatcattactaaggtggctaat
gtggagctgtattacaaggccgttcaattctatttggaatttaaacctctgttgcttaat
gatctgctgatggtgttgtcccctcggcttgaccatactcgtgctgttactttcttcacc
aaggttaaacagttaccactggttaagccttacttgcgttctgttcaaaatcacaacaac
aaatcggtgaacgagtccctgaacaaccttttcattattgaagaagactaccaggccctt
aggacttctatagatgcatatgacaactttgacaatatctctcttgctcaacgtttggag
aaacatgagctgatagagttccgaagaattgctgcgtatctcttcaaaggaaacaatcgc
tggaaacagagtgtagaactctgcaagaaagacaggctgtataaggatgcaatgcaatat
gcttcagaatccaaagatactgagctggcagaagaattgttgcagtggttcttgcaggag
aacaagaaagaatgctttggtgcttgtctgttcacctgctatgatcttctaaggccggat
gttgtcttggaaacagcatggaggcacaacatcatggactttgccatgccatacttcatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtctttgagaaaggaagaggagcaagctacagaaacacaacctattgtt
tatggtcagccccagctaatgttgacagcaggacccagcgttgcagttcctccacaagca
ccttttggctatggctacactgcgcctccgtacgggcaaccgcagcctggctttgggtac
agcatgtaa
DBGET
integrated database retrieval system
